Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Flagellar biosynthetic protein fliR

Gene

PputGB1_3915

Organism
Pseudomonas putida (strain GB-1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Role in flagellar biosynthesis.UniRule annotation

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciPPUT76869:GIXB-3979-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Flagellar biosynthetic protein fliRUniRule annotation
Gene namesi
Ordered Locus Names:PputGB1_3915Imported
OrganismiPseudomonas putida (strain GB-1)Imported
Taxonomic identifieri76869 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002157 Componenti: Chromosome

Subcellular locationi

  • Cell membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Bacterial flagellumUniRule annotation, Cell projection, Cilium, FlagellumImported, Membrane

Interactioni

Protein-protein interaction databases

STRINGi76869.PputGB1_3915.

Family & Domainsi

Sequence similaritiesi

Belongs to the fliR/mopE/spaR family.UniRule annotation

Keywords - Domaini

TransmembraneUniRule annotation

Phylogenomic databases

eggNOGiCOG1684.
HOGENOMiHOG000253545.
KOiK02421.
OMAiGSRLNMP.
OrthoDBiEOG6FBWVR.

Family and domain databases

InterProiIPR006303. FliR.
IPR002010. T3SS_IM_R.
[Graphical view]
PfamiPF01311. Bac_export_1. 1 hit.
[Graphical view]
PRINTSiPR00953. TYPE3IMRPROT.
TIGRFAMsiTIGR01400. fliR. 1 hit.

Sequencei

Sequence statusi: Complete.

B0KQX9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLELTDTQIG TWVATFILPL FRVTAVLMTM PIFGTRMLPA RVRLYVAVAI
60 70 80 90 100
TVVIVPALPP LPEFDPLSLR GLLLCAEQII VGALFGLALQ LLFQAFVIAG
110 120 130 140 150
QIVAVQMGMA FASMVDPANG VNVTVISQFM TMLVSVLFLL MNGHLVVFEV
160 170 180 190 200
LTESFTTLPV GSALVVNHFW ELAGRMGWVF AAGLLLILPV IAALLVVNIA
210 220 230 240 250
FGVMTRAAPQ LNIFSIGFPL TLVLGMFIFW VGLADVLSHY QALASETLQW

LRELARAR
Length:258
Mass (Da):28,069
Last modified:March 18, 2008 - v1
Checksum:i0CCC6C3193149018
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000926 Genomic DNA. Translation: ABY99805.1.
RefSeqiWP_012273496.1. NC_010322.1.
YP_001670141.1. NC_010322.1.

Genome annotation databases

EnsemblBacteriaiABY99805; ABY99805; PputGB1_3915.
KEGGippg:PputGB1_3915.
PATRICi19934887. VBIPsePut76638_3923.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000926 Genomic DNA. Translation: ABY99805.1.
RefSeqiWP_012273496.1. NC_010322.1.
YP_001670141.1. NC_010322.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi76869.PputGB1_3915.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABY99805; ABY99805; PputGB1_3915.
KEGGippg:PputGB1_3915.
PATRICi19934887. VBIPsePut76638_3923.

Phylogenomic databases

eggNOGiCOG1684.
HOGENOMiHOG000253545.
KOiK02421.
OMAiGSRLNMP.
OrthoDBiEOG6FBWVR.

Enzyme and pathway databases

BioCyciPPUT76869:GIXB-3979-MONOMER.

Family and domain databases

InterProiIPR006303. FliR.
IPR002010. T3SS_IM_R.
[Graphical view]
PfamiPF01311. Bac_export_1. 1 hit.
[Graphical view]
PRINTSiPR00953. TYPE3IMRPROT.
TIGRFAMsiTIGR01400. fliR. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GB-1Imported.

Entry informationi

Entry nameiB0KQX9_PSEPG
AccessioniPrimary (citable) accession number: B0KQX9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 18, 2008
Last sequence update: March 18, 2008
Last modified: May 27, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.