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B0KMH4 (B0KMH4_PSEPG) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alginate lyase 2 EMBL ABY98030.1
Gene names
Ordered Locus Names:PputGB1_2129
OrganismPseudomonas putida (strain GB-1) [Complete proteome] [HAMAP] EMBL ABY98030.1
Taxonomic identifier76869 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length224 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABY98030.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionlyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B0KMH4 [UniParc].

Last modified March 18, 2008. Version 1.
Checksum: 2633B0BDC53CAB2C

FASTA22424,190
        10         20         30         40         50         60 
MAVDISKLTI ATPIAVSSTN PVALEVNGAE AIARFPSIVK VLSDGSIQFS APTKGASSKS 

        70         80         90        100        110        120 
THRTRCEWTE TEDWTLASAQ DHWNRQTMTL TKVNAAQKVV IAQMHVRGDD SPPVKVFWNK 

       130        140        150        160        170        180 
GNITLGFRRT YNQTDPVNST VLKGVPLGEK FNISIHTTAD GVVNVTAKCN GVSGTSGDLQ 

       190        200        210        220 
LDSTWASRLF EFHGGVYNQV DYTAATPADE GSICIISELS LIHR

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References

[1]"Complete sequence of Pseudomonas putida GB-1."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., McCarthy J.K., Richardson P.
Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GB-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000926 Genomic DNA. Translation: ABY98030.1.
RefSeqYP_001668366.1. NC_010322.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB0KMH4.

Protein family/group databases

CAZyPL7. Polysaccharide Lyase Family 7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5869918.
GenomeReviewsGene locus PputGB1_2129 in contig CP000926_GR.
KEGGppg:PputGB1_2129.
PATRIC19931293. VBIPsePut76638_2134.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG638578.
OMAKSTHRTR.
ProtClustDBCLSK909453.

Enzyme and pathway databases

BioCycPPUT76869:PPUTGB1_2129-MONOMER.

Family and domain databases

InterProIPR014895. Alginate_lyase_2.
IPR008985. ConA-like_lec_gl.
IPR013320. ConA-like_subgrp.
[Graphical view]
Gene3DG3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
PfamPF08787. Alginate_lyase2. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB0KMH4_PSEPG
AccessionPrimary (citable) accession number: B0KMH4
Entry history
Integrated into UniProtKB/TrEMBL: March 18, 2008
Last sequence update: March 18, 2008
Last modified: December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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