B0KGJ0 (B0KGJ0_PSEPG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Choline dehydrogenase EMBL ABY98991.1

Gene names

Ordered Locus Names:

PputGB1_3099

Organism

Pseudomonas putida (strain GB-1) [Complete proteome] [HAMAP] EMBL ABY98991.1

Taxonomic identifier

76869 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	562 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine By similarity. SAAS SAAS007867
Catalytic activity	Choline + acceptor = betaine aldehyde + reduced acceptor. SAAS SAAS007867
Cofactor	FAD By similarity. SAAS SAAS007867
Pathway	Amine and polyamine biosynthesis; betaine biosynthesis via choline pathway; betaine aldehyde from choline (cytochrome c reductase route): step 1/1. SAAS SAAS007867

Ontologies

Keywords
Ligand	FAD SAAS SAAS011533 Flavoprotein SAAS SAAS011533
Molecular function	Oxidoreductase SAAS SAAS007867
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycine betaine biosynthetic process from choline Inferred from electronic annotation. Source: InterPro
Molecular function	choline dehydrogenase activity Inferred from electronic annotation. Source: EC flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0KGJ0 [UniParc]. Last modified March 18, 2008. Version 1. Checksum: 32CB249D9563BD35	FASTA	562	62,310
	10 20 30 40 50 60 MTKRYDYIII GAGSAGCVLA NRLSEDAGTS VLVLEFGGSD RSVLIQMPSA FSLPMNTKKY 70 80 90 100 110 120 NWHYETVAEP HLDNRRLHCP RGKVLGGSSS INGLVYIRGH ACDFDEWESL GAKNWSYRNC 130 140 150 160 170 180 LPYFKRAEQY KFGGDDYRGG AGPLSTNNGN NMQNPLYGAW VEAGAEAGYI KTDDCNGYMQ 190 200 210 220 230 240 EGFGAMHMTV KDGVRWSTAN AYLRPAMTRP NLTVITHAMT RRILLDGKRA VGVEYDHGGQ 250 260 270 280 290 300 THKVMCNREV LVASGPIGSP HLLQRSGIGP AAVLKSAGIE VRHDLPGVGE NLQDHSEIYI 310 320 330 340 350 360 QYACKQPVTL NGKMNLLGKA MIGLRWLLFK DGLGASNHFE AGGFIRSSKG LRWPDIQFHF 370 380 390 400 410 420 LPAAMRYDGD KPFKGHGFMV LTGPNKPKSR GHVRALSADP YQHPQIRFNY LESEEDREGF 430 440 450 460 470 480 RRCVRLTREI IAQPAMDRYR GEELAPGPQV QTDEEIDAFV RANMESTMHP CGSCRMGEDE 490 500 510 520 530 540 MAVVDSMLRV RGLQGLRVID SSVFPSEPNG NLNAPTIMLA ERAADLVRGR QPLAPVDVPV 550 560 GLVGGWEEEQ RSRKPVREMP IR

References

[1]

"Complete sequence of Pseudomonas putida GB-1." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Kim E., McCarthy J.K., Richardson P. Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GB-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000926 Genomic DNA. Translation: ABY98991.1.
RefSeq	YP_001669327.1. NC_010322.1.
3D structure databases
ProteinModelPortal	B0KGJ0.
ModBase	Search...
Protein-protein interaction databases
STRING	B0KGJ0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5870884.
GenomeReviews	Gene locus PputGB1_3099 in contig CP000926_GR.
KEGG	ppg:PputGB1_3099.
PATRIC	19933253. VBIPsePut76638_3114.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG734713.
OMA	HMTVKNG.
ProtClustDB	PRK02106.
Enzyme and pathway databases
BioCyc	PPUT76869:PPUTGB1_3099-MONOMER.
Family and domain databases
InterPro	IPR011533. Choline_dehydrogenase. IPR012132. GMC_OxRdtase. IPR000172. GMC_OxRdtase_N. IPR007867. GMC_OxRtase_C. [Graphical view]
KO	K00108.
Pfam	PF05199. GMC_oxred_C. 1 hit. PF00732. GMC_oxred_N. 1 hit. [Graphical view]
PIRSF	PIRSF000137. Alcohol_oxidase. 1 hit.
TIGRFAMs	TIGR01810. BetA. 1 hit.
PROSITE	PS00623. GMC_OXRED_1. 1 hit. PS00624. GMC_OXRED_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0KGJ0_PSEPG

Accession

Primary (citable) accession number: B0KGJ0

Entry history

Integrated into UniProtKB/TrEMBL:	March 18, 2008
Last sequence update:	March 18, 2008
Last modified:	January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)