B0K5Y9 (B0K5Y9_THEPX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Ordered Locus Names:

Teth514_0964

Organism

Thermoanaerobacter sp. (strain X514) [Complete proteome] [HAMAP] EMBL ABY92265.1

Taxonomic identifier

399726 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacteraceae › Thermoanaerobacter

Protein attributes

Sequence length	388 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622 RuleBase RU004247
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase SAAS SAAS020622 RuleBase RU000608 EMBL ABY92265.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0K5Y9 [UniParc]. Last modified March 18, 2008. Version 1. Checksum: 35EE01B5FB0C3AEE	FASTA	388	43,792
	10 20 30 40 50 60 MFDNIRPTRA EIYLDNIVHN LSEVKRWVGK KVKIMGVVKA NAYGHGACQV AKVLIENGVS 70 80 90 100 110 120 YLGVATIEEA LELRECGINI PILVFGYTPL PQAKELIVHN ITQTVFDINY VKDLERIALN 130 140 150 160 170 180 VGKKAKVHVK VDTGMGRIGY TDLNVAEKEI EKMMEMEGVE VEGIFSHFAT SDEKDKTYAE 190 200 210 220 230 240 QQFDMFKKLL ESLKQKEINI PLKHIANSGA IIDLKYTYLD MVRPGIVLYG SYPSENVERP 250 260 270 280 290 300 LDLRQTMGFK TKIVYIKEVP EGTSISYGRT FITKRKSKIA TLPVGYADGF NRLLSNNHHV 310 320 330 340 350 360 LVKGKYAPVI GRICMDQTML DVTDIEGVEV GDDVTIFGNQ DGEKITAEEI AKKLNTIPYE 370 380 VYCGISRRVP RIYIYKGEVI EVKNYLKI

References

[1]

"Complete sequence of Thermoanaerobacter sp. X514." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Saunders E., Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Kim E., Hemme C., Fields M.W., He Z., Zhou J., Richardson P. Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: X514.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000923 Genomic DNA. Translation: ABY92265.1.
RefSeq	YP_001662601.1. NC_010320.1.
3D structure databases
ProteinModelPortal	B0K5Y9.
ModBase	Search...
Protein-protein interaction databases
STRING	399726.Teth514_0964.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABY92265; ABY92265; Teth514_0964.
GeneID	5875853.
KEGG	tex:Teth514_0964.
PATRIC	23891544. VBITheSp86957_1010.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031444.
KO	K01775.
OMA	PTLCNPQ.
ProtClustDB	CLSK901100.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0K5Y9_THEPX

Accession

Primary (citable) accession number: B0K5Y9

Entry history

Integrated into UniProtKB/TrEMBL:	March 18, 2008
Last sequence update:	March 18, 2008
Last modified:	May 1, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)