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Protein

Ribosomal RNA small subunit methyltransferase B

Gene

MAE_52350

Organism
Microcystis aeruginosa (strain NIES-843)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationImported, Transferase

Keywords - Biological processi

rRNA processingSAAS annotation

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Enzyme and pathway databases

BioCyciMAER449447:GHO8-5276-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase BSAAS annotation (EC:2.1.1.-SAAS annotation)
Gene namesi
Ordered Locus Names:MAE_52350Imported
OrganismiMicrocystis aeruginosa (strain NIES-843)Imported
Taxonomic identifieri449447 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesMicrocystis
Proteomesi
  • UP000001510 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiB0JY19.
PRIDEiB0JY19.

Interactioni

Protein-protein interaction databases

STRINGi449447.MAE_52350.

Structurei

3D structure databases

ProteinModelPortaliB0JY19.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini172 – 445274SAM_MT_RSMB_NOPInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiEOG6091D0.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0JY19-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNARQLALL ILRDIDRSSA YPDRALDRHL SASSLNCLDT ALTTEIVYGI
60 70 80 90 100
IRRQRTLDAL LDRLGKKTAA QQPPDLRRIL HIGLYQLRYL SQIPPSAAVN
110 120 130 140 150
TAVELTKISH LGKLAAVVNG MLRQYLRLTA NGDDPLLLPE NTASRLGILH
160 170 180 190 200
SFPDWLVQLW LDRFSVTETE QLCQWFNRSP DLDIRINPLK TSREALENEL
210 220 230 240 250
ESANITFHHL KLPLACRLTS GLGNIERLEG FRAGNYTLQD ISAQLVTYLL
260 270 280 290 300
DPQPGETIID ACAAPGGKTT HIAELMGDRG RILACDQTAS RLRQLEANIK
310 320 330 340 350
RLDLKAIEIH LGDSRDRPQW HGIADRVLID APCSGLGTLH KRPDIRWRQT
360 370 380 390 400
PENLPVLAKR QGELLASAAT WVKPKGILVY ATCTLDPLEN ERVIEQFLAA
410 420 430 440 450
HPDWKMATPD SNSCVSEYYT ETGAIEVLPH RHNQDGFFMA KLVKEVWDEK
Length:450
Mass (Da):50,563
Last modified:March 18, 2008 - v1
Checksum:i9C0B4748C02921CE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009552 Genomic DNA. Translation: BAG05057.1.
RefSeqiWP_012267617.1. NC_010296.1.

Genome annotation databases

EnsemblBacteriaiBAG05057; BAG05057; MAE_52350.
GeneIDi5866072.
KEGGimar:MAE_52350.
PATRICi22634929. VBIMicAer59304_4768.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009552 Genomic DNA. Translation: BAG05057.1.
RefSeqiWP_012267617.1. NC_010296.1.

3D structure databases

ProteinModelPortaliB0JY19.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi449447.MAE_52350.

Proteomic databases

PaxDbiB0JY19.
PRIDEiB0JY19.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAG05057; BAG05057; MAE_52350.
GeneIDi5866072.
KEGGimar:MAE_52350.
PATRICi22634929. VBIMicAer59304_4768.

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiEOG6091D0.

Enzyme and pathway databases

BioCyciMAER449447:GHO8-5276-MONOMER.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NIES-843Imported.

Entry informationi

Entry nameiB0JY19_MICAN
AccessioniPrimary (citable) accession number: B0JY19
Entry historyi
Integrated into UniProtKB/TrEMBL: March 18, 2008
Last sequence update: March 18, 2008
Last modified: May 11, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.