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B0JQ20 (B0JQ20_MICAN) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase HAMAP MF_00388
EC=3.5.1.- HAMAP MF_00388
Alternative name(s):
UDP-3-O-acyl-GlcNAc deacetylase HAMAP MF_00388
Gene names
Name:lpxC HAMAP MF_00388
Ordered Locus Names:MAE_39220
OrganismMicrocystis aeruginosa (strain NIES-843) [Complete proteome] [HAMAP]
Taxonomic identifier449447 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Microcystis

Protein attributes

Sequence length270 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell By similarity. HAMAP MF_00388 SAAS SAAS015870

Catalytic activity

UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine + H2O = UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine + acetate. HAMAP MF_00388 SAAS SAAS015870

Pathway

Glycolipid biosynthesis; lipid IV(A) biosynthesis; lipid IV(A) from (3R)-3-hydroxytetradecanoyl-[acyl-carrier-protein] and UDP-N-acetyl-alpha-D-glucosamine: step 2/6. HAMAP MF_00388 SAAS SAAS015870

Sequence similarities

Belongs to the LpxC family. HAMAP MF_00388

Sequences

Sequence LengthMass (Da)Tools
B0JQ20 [UniParc].

Last modified March 18, 2008. Version 1.
Checksum: EFF93084AB307D6A

FASTA27029,540
        10         20         30         40         50         60 
MVSTIAKQFE LSGIGLHSGE ITRVRVCGAN PGEGRYFVRR DLANQPIIPA LVSSVYQTTL 

        70         80         90        100        110        120 
STELGQGEAK VRTVEHLLAA LTALGVEDAR IEVDGAEIPL LDGSAKIWVE AIENAGLNNS 

       130        140        150        160        170        180 
FSPSDLTISQ PIWLYEGDAF VAAIPSPELR FTYGIDFTYK PIGNQWYSWS PDQESFSQAI 

       190        200        210        220        230        240 
ASARTFGFAD QIEYLQKAGL IKGGSLENAL VCDQNQWLNP PLRFENEPVR HKLLDLIGDL 

       250        260        270 
SLLGTIPTAH YMAFKASHKL HVQLAKAIQG

« Hide

References

[1]"Complete genomic structure of the bloom-forming toxic cyanobacterium Microcystis aeruginosa NIES-843."
Kaneko T., Nakajima N., Okamoto S., Suzuki I., Tanabe Y., Tamaoki M., Nakamura Y., Kasai F., Watanabe A., Kawashima K., Kishida Y., Ono A., Shimizu Y., Takahashi C., Minami C., Fujishiro T., Kohara M., Katoh M. expand/collapse author list , Nakazaki N., Nakayama S., Yamada M., Tabata S., Watanabe M.M.
DNA Res. 14:247-256(2007) [PubMed: 18192279] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP009552 Genomic DNA. Translation: BAG03744.1.
RefSeqYP_001658936.1. NC_010296.1.

3D structure databases

ProteinModelPortalB0JQ20.
ModBaseSearch...

Protein-protein interaction databases

STRINGB0JQ20.

Proteomic databases

PRIDEB0JQ20.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5864750.
GenomeReviewsGene locus MAE_39220 in contig AP009552_GR.
KEGGmar:MAE_39220.
PATRIC22632475. VBIMicAer59304_3550.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG482342.
OMAKAYKSGH.
PhylomeDBB0JQ20.
ProtClustDBPRK13186.

Family and domain databases

HAMAPMF_00388. LpxC.
[Tree]
InterProIPR020568. Ribosomal_S5_D2-typ_fold.
IPR004463. UDP-acyl_GlcNac_deAcase.
IPR011334. UDP-acyl_GlcNac_deAcase_C.
IPR015870. UDP-acyl_N-AcGlcN_deAcase_N.
[Graphical view]
Gene3DG3DSA:3.30.1700.10. UDP-acyl_N-AcGlcN_deAcase_C. 1 hit.
G3DSA:3.30.230.20. UDP-acyl_N-AcGlcN_deAcase_N. 1 hit.
KOK02535.
PfamPF03331. LpxC. 1 hit.
[Graphical view]
SUPFAMSSF54211. Ribosomal_S5_D2-typ_fold. 2 hits.
TIGRFAMsTIGR00325. LpxC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB0JQ20_MICAN
AccessionPrimary (citable) accession number: B0JQ20
Entry history
Integrated into UniProtKB/TrEMBL: March 18, 2008
Last sequence update: March 18, 2008
Last modified: January 25, 2012
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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