B0JNQ3 (B0JNQ3_MICAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Transcription antitermination protein nusG RuleBase RU000538

Gene names

Name:	nusG EMBL BAG03483.1
Ordered Locus Names:	MAE_36610

Organism

Microcystis aeruginosa (strain NIES-843) [Complete proteome] [HAMAP]

Taxonomic identifier

449447 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Microcystis

Protein attributes

Sequence length	205 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. RuleBase RU000538 SAAS SAAS006645
Sequence similarities	Belongs to the nusG family. RuleBase RU003559

Ontologies

Keywords
Biological process	Transcription Transcription antitermination SAAS SAAS006645 RuleBase RU000538 Transcription regulation Transcription termination RuleBase RU000538 SAAS SAAS006645
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	positive regulation of transcription elongation from RNA polymerase II promoter Inferred from electronic annotation. Source: InterPro transcription antitermination Inferred from electronic annotation. Source: UniProtKB-KW transcription termination, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0JNQ3 [UniParc]. Last modified March 18, 2008. Version 1. Checksum: 464FAAFCF4BCD8FD	FASTA	205	23,364
	10 20 30 40 50 60 MNLEEEQFPE EVNLSNLPKK PRWYAVQVAS GCEKRVKANL EQRIHTLDVA DRILQVQIPQ 70 80 90 100 110 120 AATVKVRKDG SRQHGEEKVF PGYVLIKMIM DDDAWQVVKN TPHVINFVGA EQKRHYGRGR 130 140 150 160 170 180 GHVTPLPLSM SEVDRIFKQA QIQEPVVKIN MEVGDQILVL SGPFKDFEGE VIEVSPERGK 190 200 LKALLSIFGR DTPVELEFNQ VEKQN

References

[1]

"Complete genomic structure of the bloom-forming toxic cyanobacterium Microcystis aeruginosa NIES-843." Kaneko T., Nakajima N., Okamoto S., Suzuki I., Tanabe Y., Tamaoki M., Nakamura Y., Kasai F., Watanabe A., Kawashima K., Kishida Y., Ono A., Shimizu Y., Takahashi C., Minami C., Fujishiro T., Kohara M., Katoh M. , Nakazaki N., Nakayama S., Yamada M., Tabata S., Watanabe M.M. DNA Res. 14:247-256(2007) [PubMed: 18192279] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009552 Genomic DNA. Translation: BAG03483.1.
RefSeq	YP_001658675.1. NC_010296.1.
3D structure databases
ProteinModelPortal	B0JNQ3.
SMR	B0JNQ3. Positions 154-203.
ModBase	Search...
Protein-protein interaction databases
STRING	B0JNQ3.
Proteomic databases
PRIDE	B0JNQ3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5864485.
GenomeReviews	Gene locus MAE_36610 in contig AP009552_GR.
KEGG	mar:MAE_36610.
PATRIC	22631999. VBIMicAer59304_3316.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG751162.
OMA	VASGCEK.
PhylomeDB	B0JNQ3.
ProtClustDB	PRK05609.
Family and domain databases
InterPro	IPR005824. KOW. IPR001062. Transcrpt_antiterm_NusG. IPR015869. Transcrpt_antiterm_NusG_bac_CS. IPR006645. Transcrpt_antiterm_NusG_N. IPR014722. Transl_SH3-like_sub. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.30.30.30. Ribosomal_L2. 1 hit. G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KO	K02601.
Pfam	PF00467. KOW. 1 hit. PF02357. NusG. 1 hit. [Graphical view]
PRINTS	PR00338. NUSGTNSCPFCT.
SMART	SM00739. KOW. 1 hit. SM00738. NGN. 1 hit. [Graphical view]
SUPFAM	SSF82679. Transcrpt_antiterm_NusG_N. 1 hit. SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR00922. NusG. 1 hit.
PROSITE	PS01014. NUSG. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0JNQ3_MICAN

Accession

Primary (citable) accession number: B0JNQ3

Entry history

Integrated into UniProtKB/TrEMBL:	March 18, 2008
Last sequence update:	March 18, 2008
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)