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B0DXH7 (B0DXH7_LACBS) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length552 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site2311Nucleophile By similarity PIRSR PIRSR001024-1
Active site2551Proton donor By similarity PIRSR PIRSR001024-1
Metal binding1411Calcium 1 By similarity PIRSR PIRSR001024-3
Metal binding1871Calcium 1; via carbonyl oxygen By similarity PIRSR PIRSR001024-3
Metal binding2001Calcium 1 By similarity PIRSR PIRSR001024-3
Metal binding2311Calcium 2 By similarity PIRSR PIRSR001024-3
Metal binding2351Calcium 1; via carbonyl oxygen By similarity PIRSR PIRSR001024-3
Metal binding2551Calcium 2 By similarity PIRSR PIRSR001024-3
Site3221Transition state stabilizer By similarity PIRSR PIRSR001024-2

Amino acid modifications

Disulfide bond50 ↔ 58 By similarity
Disulfide bond175 ↔ 189 By similarity

Sequences

Sequence LengthMass (Da)Tools
B0DXH7 [UniParc].

Last modified February 26, 2008. Version 1.
Checksum: 7F8B25A6B753BC3D

FASTA55258,889
        10         20         30         40         50         60 
MFATRFSVFS VLLLAVPTAL AASATDWRGR AIYQLLTDRF SLSTNQATSC NTTQALYCNG 

        70         80         90        100        110        120 
TWNGITNHLD YIQGMGFDSI WISPIVANVE QTTAYGQAYH GYWAQDITSL NPHFGTADDL 

       130        140        150        160        170        180 
KALSAALHKR NMYLMVDVVV NHFVSTSSVA TSNNANLDFS KLVPFSNSSD FHPYCLITDY 

       190        200        210        220        230        240 
NNQTNVEQCW LGDQYLPLVD LNTENPSIVS TMNNWIQGLV KSYGIDGLRI DTAKHVRKDF 

       250        260        270        280        290        300 
WPAFAKAAGV FTMGEVLIGD VGYAAPYTEV LDSVLDYPNY YTLTSAFGSQ TGNFSALINT 

       310        320        330        340        350        360 
VTASQKSYST PSVVGSFLEN HDNPRFQSIT QDISLVKNAM TWPFIQDGIP ILYQGQEQGF 

       370        380        390        400        410        420 
TGGAMPGNRE ALWPTGFVTS NKPLVTHVTT LNAARKAAAA ANSTFLTTPL KFIIQQDPSL 

       430        440        450        460        470        480 
LAVSKPPLVA LLSNLGSNST KSSTWVAPGV ASANEVLVDV LSCAVVKADG SGGVSVPVVN 

       490        500        510        520        530        540 
GLPQVLIPAS ALAKNGTVCP SVATGSSSGT SGGGKKSGVI SIRGGLGFGG MEDGWVVRML 

       550 
GVVLVGFLAQ GW 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS547147 Genomic DNA. Translation: EDR00621.1.
RefSeqXP_001888630.1. XM_001888595.1.

3D structure databases

ProteinModelPortalB0DXH7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING29883.JGI313084.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6084269.
KEGGlbc:LACBIDRAFT_395881.

Phylogenomic databases

KOK01176.
OrthoDBEOG7RBZJ4.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013777. A-amylase_fun.
IPR015340. A_amylase_DUF1966_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09260. DUF1966. 1 hit.
[Graphical view]
PIRSFPIRSF001024. Alph-amyl_fung. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB0DXH7_LACBS
AccessionPrimary (citable) accession number: B0DXH7
Entry history
Integrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: July 9, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)