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B0DTG5

- B0DTG5_LACBS

UniProt

B0DTG5 - B0DTG5_LACBS

Protein

Glutamate decarboxylase

Gene

LACBIDRAFT_254229

Organism
Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (26 Feb 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    ORF Names:LACBIDRAFT_254229Imported
    OrganismiLaccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor)Imported
    Taxonomic identifieri486041 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesTricholomataceaeLaccaria
    ProteomesiUP000001194: Unassembled WGS sequence

    Interactioni

    Protein-protein interaction databases

    STRINGi29883.JGI254229.

    Structurei

    3D structure databases

    ProteinModelPortaliB0DTG5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.
    OrthoDBiEOG7P2Z22.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B0DTG5-1 [UniParc]FASTAAdd to Basket

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    MSLSRHINAE EVIEACKEHP HKKHSIRASG SGTGYHQTWR RDEDAQLAPK    50
    YTLPKVGIPS KAAYQLLHDQ TALDGNPLLN LASFVHTWMP EEADKLIMEN 100
    INKNIVDLDE YPAASIIHNR AISMLADLWK APKEGKVIGT ATAGSSEAIM 150
    LGGLAMKKRW QEARKAAGKD YFHPNIVFGS NAQVALEKFA RYFDVETRLV 200
    PVKASNGFIM DPNDALQFID ENTIGVIVIL GSTYTGHFEN VALMSKLLDD 250
    LQERTGLDIP IHVDGASGAF IAPFAYPKLK WSFDVPRVVS INTSGHKFGL 300
    VYAGLGWVLW RDEKYLHKDL VFELHYLGST EYSFTLNFSK PAAPVIAQMF 350
    NFLNLGFEGY RKIAIKDLRN ARLLSRALEN TYFEVLSDIH RPVKGDAHAK 400
    HDVDDPEHYL PGLPVVSFRL SDKFKQEYPH VQQGWVQSLL RTKGWIVPNY 450
    NAPLGAAEVE ILRVVVRETL SQDLVERLIV DILEITEKLL GKTRFLSIE 499
    Length:499
    Mass (Da):56,109
    Last modified:February 26, 2008 - v1
    Checksum:iBC2BB1F60F02F196
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS547133 Genomic DNA. Translation: EDR02060.1.
    RefSeqiXP_001887217.1. XM_001887182.1.

    Genome annotation databases

    GeneIDi6082847.
    KEGGilbc:LACBIDRAFT_254229.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS547133 Genomic DNA. Translation: EDR02060.1 .
    RefSeqi XP_001887217.1. XM_001887182.1.

    3D structure databases

    ProteinModelPortali B0DTG5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 29883.JGI254229.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 6082847.
    KEGGi lbc:LACBIDRAFT_254229.

    Phylogenomic databases

    KOi K01580.
    OrthoDBi EOG7P2Z22.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis."
      Martin F., Aerts A., Ahren D., Brun A., Danchin E.G.J., Duchaussoy F., Gibon J., Kohler A., Lindquist E., Pereda V., Salamov A., Shapiro H.J., Wuyts J., Blaudez D., Buee M., Brokstein P., Canbaeck B., Cohen D.
      , Courty P.E., Coutinho P.M., Delaruelle C., Detter J.C., Deveau A., DiFazio S., Duplessis S., Fraissinet-Tachet L., Lucic E., Frey-Klett P., Fourrey C., Feussner I., Gay G., Grimwood J., Hoegger P.J., Jain P., Kilaru S., Labbe J., Lin Y.C., Legue V., Le Tacon F., Marmeisse R., Melayah D., Montanini B., Muratet M., Nehls U., Niculita-Hirzel H., Oudot-Le Secq M.P., Peter M., Quesneville H., Rajashekar B., Reich M., Rouhier N., Schmutz J., Yin T., Chalot M., Henrissat B., Kuees U., Lucas S., Van de Peer Y., Podila G.K., Polle A., Pukkila P.J., Richardson P.M., Rouze P., Sanders I.R., Stajich J.E., Tunlid A., Tuskan G., Grigoriev I.V.
      Nature 452:88-92(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S238N-H82 / ATCC MYA-4686Imported.

    Entry informationi

    Entry nameiB0DTG5_LACBS
    AccessioniPrimary (citable) accession number: B0DTG5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 26, 2008
    Last sequence update: February 26, 2008
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3