B0DTG5 (B0DTG5_LACBS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL EDR02060.1
EC=4.1.1.15 EMBL EDR02060.1

Gene names

ORF Names:

LACBIDRAFT_254229 EMBL EDR02060.1

Organism

Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor) [Complete proteome]

Taxonomic identifier

486041 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Basidiomycota › Agaricomycotina › Agaricomycetes › Agaricomycetidae › Agaricales › Tricholomataceae › Laccaria › Laccaria bicolor

Protein attributes

Sequence length	499 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL EDR02060.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0DTG5 [UniParc]. Last modified February 26, 2008. Version 1. Checksum: BC2BB1F60F02F196	FASTA	499	56,109
	10 20 30 40 50 60 MSLSRHINAE EVIEACKEHP HKKHSIRASG SGTGYHQTWR RDEDAQLAPK YTLPKVGIPS 70 80 90 100 110 120 KAAYQLLHDQ TALDGNPLLN LASFVHTWMP EEADKLIMEN INKNIVDLDE YPAASIIHNR 130 140 150 160 170 180 AISMLADLWK APKEGKVIGT ATAGSSEAIM LGGLAMKKRW QEARKAAGKD YFHPNIVFGS 190 200 210 220 230 240 NAQVALEKFA RYFDVETRLV PVKASNGFIM DPNDALQFID ENTIGVIVIL GSTYTGHFEN 250 260 270 280 290 300 VALMSKLLDD LQERTGLDIP IHVDGASGAF IAPFAYPKLK WSFDVPRVVS INTSGHKFGL 310 320 330 340 350 360 VYAGLGWVLW RDEKYLHKDL VFELHYLGST EYSFTLNFSK PAAPVIAQMF NFLNLGFEGY 370 380 390 400 410 420 RKIAIKDLRN ARLLSRALEN TYFEVLSDIH RPVKGDAHAK HDVDDPEHYL PGLPVVSFRL 430 440 450 460 470 480 SDKFKQEYPH VQQGWVQSLL RTKGWIVPNY NAPLGAAEVE ILRVVVRETL SQDLVERLIV 490 DILEITEKLL GKTRFLSIE

References

[1]

"The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis." Martin F., Aerts A., Ahren D., Brun A., Danchin E.G.J., Duchaussoy F., Gibon J., Kohler A., Lindquist E., Pereda V., Salamov A., Shapiro H.J., Wuyts J., Blaudez D., Buee M., Brokstein P., Canbaeck B., Cohen D. , Courty P.E., Coutinho P.M., Delaruelle C., Detter J.C., Deveau A., DiFazio S., Duplessis S., Fraissinet-Tachet L., Lucic E., Frey-Klett P., Fourrey C., Feussner I., Gay G., Grimwood J., Hoegger P.J., Jain P., Kilaru S., Labbe J., Lin Y.C., Legue V., Le Tacon F., Marmeisse R., Melayah D., Montanini B., Muratet M., Nehls U., Niculita-Hirzel H., Oudot-Le Secq M.P., Peter M., Quesneville H., Rajashekar B., Reich M., Rouhier N., Schmutz J., Yin T., Chalot M., Henrissat B., Kuees U., Lucas S., Van de Peer Y., Podila G.K., Polle A., Pukkila P.J., Richardson P.M., Rouze P., Sanders I.R., Stajich J.E., Tunlid A., Tuskan G., Grigoriev I.V. Nature 452:88-92(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 / ATCC MYA-4686.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS547133 Genomic DNA. Translation: EDR02060.1.
RefSeq	XP_001887217.1. XM_001887182.1.
3D structure databases
ProteinModelPortal	B0DTG5.
ModBase	Search...
Protein-protein interaction databases
STRING	29883.JGI254229.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6082847.
KEGG	lbc:LACBIDRAFT_254229.
Phylogenomic databases
KO	K01580.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B0DTG5_LACBS

Accession

Primary (citable) accession number: B0DTG5

Entry history

Integrated into UniProtKB/TrEMBL:	February 26, 2008
Last sequence update:	February 26, 2008
Last modified:	April 3, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)