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B0D3H6

- B0D3H6_LACBS

UniProt

B0D3H6 - B0D3H6_LACBS

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Protein

Glutamate decarboxylase

Gene

LACBIDRAFT_315921

Organism
Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:LACBIDRAFT_315921Imported
OrganismiLaccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor)Imported
Taxonomic identifieri486041 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesTricholomataceaeLaccaria
ProteomesiUP000001194: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi29883.JGI315921.

Structurei

3D structure databases

ProteinModelPortaliB0D3H6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiB0D3H6.
KOiK01580.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

B0D3H6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALSKHVNAD HLIQKSHDKH ATHGEFAAEQ AQEATYSYGS RYGTNPVPKY
60 70 80 90 100
RISSKGVSAD AAYQIIHDEL SLDGSTVLNL ASFVHTWMPP QADKLVHENI
110 120 130 140 150
TKNLIDTDEY PATQIIHTRC ISILADVWHA PSSKQAIGTA TTGSSEAIQL
160 170 180 190 200
GGLAMKKIWQ AKRKAAGKSI HEPGPNIVMG ANAQVALEKF ARYFDVECRL
210 220 230 240 250
VPISVQSKYR LDPKEAIKYV DENTIGVFVI LGSTYTGHYE PVKEISDLLD
260 270 280 290 300
EYEAKTGNSV PIHVDAASGG FIAPFAHPKL LWDFKLPRVV SINTSGHKFG
310 320 330 340 350
LSYVGVGWVV WRDKAHLPKD LIFELHYLGS VEYSFSLNFS RPAAPIIAQY
360 370 380 390 400
FNLLHLGFEG YREVALDDLK NARLLSRALE NTGYYTVLSD VHRSVGAVGG
410 420 430 440 450
KGIDTHDVEA YEPGLPVVAF RFSDEFQQKN PEVEQKWIQT LLRAKGWIVP
460 470 480 490 500
NYELAPDLQQ VQILRVVIRE NVTEVLLDKL IADIVEITEE LASKASSEHA
510 520 530
LNVLGQMHGA RKKHEHKTST FDAGEGSEAS GTYARSC
Length:537
Mass (Da):59,454
Last modified:February 26, 2008 - v1
Checksum:i97441FD1A73AD534
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS547096 Genomic DNA. Translation: EDR10921.1.
RefSeqiXP_001878222.1. XM_001878187.1.

Genome annotation databases

GeneIDi6073940.
KEGGilbc:LACBIDRAFT_315921.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS547096 Genomic DNA. Translation: EDR10921.1 .
RefSeqi XP_001878222.1. XM_001878187.1.

3D structure databases

ProteinModelPortali B0D3H6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 29883.JGI315921.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 6073940.
KEGGi lbc:LACBIDRAFT_315921.

Phylogenomic databases

InParanoidi B0D3H6.
KOi K01580.
OrthoDBi EOG7P2Z22.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis."
    Martin F., Aerts A., Ahren D., Brun A., Danchin E.G.J., Duchaussoy F., Gibon J., Kohler A., Lindquist E., Pereda V., Salamov A., Shapiro H.J., Wuyts J., Blaudez D., Buee M., Brokstein P., Canbaeck B., Cohen D.
    , Courty P.E., Coutinho P.M., Delaruelle C., Detter J.C., Deveau A., DiFazio S., Duplessis S., Fraissinet-Tachet L., Lucic E., Frey-Klett P., Fourrey C., Feussner I., Gay G., Grimwood J., Hoegger P.J., Jain P., Kilaru S., Labbe J., Lin Y.C., Legue V., Le Tacon F., Marmeisse R., Melayah D., Montanini B., Muratet M., Nehls U., Niculita-Hirzel H., Oudot-Le Secq M.P., Peter M., Quesneville H., Rajashekar B., Reich M., Rouhier N., Schmutz J., Yin T., Chalot M., Henrissat B., Kuees U., Lucas S., Van de Peer Y., Podila G.K., Polle A., Pukkila P.J., Richardson P.M., Rouze P., Sanders I.R., Stajich J.E., Tunlid A., Tuskan G., Grigoriev I.V.
    Nature 452:88-92(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S238N-H82 / ATCC MYA-4686Imported.

Entry informationi

Entry nameiB0D3H6_LACBS
AccessioniPrimary (citable) accession number: B0D3H6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: October 29, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3