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Protein
Submitted name:

Manganese superoxide dismutase

Gene

LbMnSOD1

Organism
Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Manganese superoxide dismutaseImported
Gene namesi
Name:LbMnSOD1Imported
ORF Names:LACBIDRAFT_312019Imported
OrganismiLaccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor)Imported
Taxonomic identifieri486041 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesTricholomataceaeLaccaria
Proteomesi
  • UP000001194 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini295 – 33743Sod_Fe_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410J6M8. Eukaryota.
ENOG410XZR3. LUCA.
InParanoidiB0CYW0.
KOiK04564.
OrthoDBiEOG75B8GQ.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 2 hits.
PfamiPF02777. Sod_Fe_C. 1 hit.
[Graphical view]
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 2 hits.

Sequencei

Sequence statusi: Complete.

B0CYW0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNLSLRLIP SNLRRSCFVL DGIKSRTRNV HKVPPLQYSI EKGLGKFLPP
60 70 80 90 100
LALKTVVEYQ QGLLDRLNEE VKDTAEENMS VAQTVINTST LRERTLAFNY
110 120 130 140 150
ASLALNNSFF LDHLKPPPSP DSDHEDKISI ELLNHIRRSH GDLKQLKSTF
160 170 180 190 200
SSAALSLFTN GFVWFVCDSN GATGVLPTLG PGTLLVRSRT YMGKDGLVLG
210 220 230 240 250
QKYSDPVVSP PNAPKPQNPA WSRAQSPTPH PSPPGVSPSS PTSGISGTNT
260 270 280 290 300
PSNPDPLRPR FLHTSASRSG LNTTPASLYS SLKPTSTASM LNVGQVLYPL
310 320 330 340 350
FCVSVHEHAW LSAGYGVWGR EEWLRQFWKV LDWQKVSMSF QAVCGNHTAS

TI
Length:352
Mass (Da):38,618
Last modified:February 26, 2008 - v1
Checksum:iEA2073ABAADD3ADB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS547094 Genomic DNA. Translation: EDR12953.1.
RefSeqiXP_001877217.1. XM_001877182.1.

Genome annotation databases

EnsemblFungiiEDR12953; EDR12953; LACBIDRAFT_312019.
GeneIDi6072383.
KEGGilbc:LACBIDRAFT_312019.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS547094 Genomic DNA. Translation: EDR12953.1.
RefSeqiXP_001877217.1. XM_001877182.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiEDR12953; EDR12953; LACBIDRAFT_312019.
GeneIDi6072383.
KEGGilbc:LACBIDRAFT_312019.

Phylogenomic databases

eggNOGiENOG410J6M8. Eukaryota.
ENOG410XZR3. LUCA.
InParanoidiB0CYW0.
KOiK04564.
OrthoDBiEOG75B8GQ.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 2 hits.
PfamiPF02777. Sod_Fe_C. 1 hit.
[Graphical view]
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis."
    Martin F., Aerts A., Ahren D., Brun A., Danchin E.G.J., Duchaussoy F., Gibon J., Kohler A., Lindquist E., Pereda V., Salamov A., Shapiro H.J., Wuyts J., Blaudez D., Buee M., Brokstein P., Canbaeck B., Cohen D.
    , Courty P.E., Coutinho P.M., Delaruelle C., Detter J.C., Deveau A., DiFazio S., Duplessis S., Fraissinet-Tachet L., Lucic E., Frey-Klett P., Fourrey C., Feussner I., Gay G., Grimwood J., Hoegger P.J., Jain P., Kilaru S., Labbe J., Lin Y.C., Legue V., Le Tacon F., Marmeisse R., Melayah D., Montanini B., Muratet M., Nehls U., Niculita-Hirzel H., Oudot-Le Secq M.P., Peter M., Quesneville H., Rajashekar B., Reich M., Rouhier N., Schmutz J., Yin T., Chalot M., Henrissat B., Kuees U., Lucas S., Van de Peer Y., Podila G.K., Polle A., Pukkila P.J., Richardson P.M., Rouze P., Sanders I.R., Stajich J.E., Tunlid A., Tuskan G., Grigoriev I.V.
    Nature 452:88-92(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S238N-H82 / ATCC MYA-4686Imported.

Entry informationi

Entry nameiB0CYW0_LACBS
AccessioniPrimary (citable) accession number: B0CYW0
Entry historyi
Integrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: March 16, 2016
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.