B0CRL8 (B0CRL8_LACBS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EDR15839.1

Gene names

ORF Names:

LACBIDRAFT_301208 EMBL EDR15839.1

Organism

Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor) [Complete proteome]

Taxonomic identifier

486041 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Basidiomycota › Agaricomycotina › Agaricomycetes › Agaricomycetidae › Agaricales › Tricholomataceae › Laccaria › Laccaria bicolor

Protein attributes

Sequence length	1163 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 helicase ATP-binding domain. SAAS SAAS007502 Contains 1 helicase C-terminal domain. SAAS SAAS007502

Ontologies

Keywords
Ligand	ATP-binding Nucleotide-binding
Molecular function	Helicase RuleBase RU000452 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent helicase activity Inferred from electronic annotation. Source: InterPro RNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0CRL8 [UniParc]. Last modified February 26, 2008. Version 1. Checksum: CEAFB3C94B759CB3	FASTA	1,163	130,200
	10 20 30 40 50 60 MADQDLYNLE FLSLVAKITQ EIDNYTGIND KTLAEFVISL HEQANKSLPD FKAQLNDVGA 70 80 90 100 110 120 DFPDSFVENV DRLILSMHPK HKKHYPKSAK ANGNSKADEG NGELSEKERQ KRLFPGLALQ 130 140 150 160 170 180 DKDVPPAVPD DVFLQELGDL VSGKKSRPSP TRDEPSPKRQ RRGRSPSPRR RSPSPGRGRG 190 200 210 220 230 240 DRRDDRWGGR NGGGRQMDER PVIFKIYNGK VTGLKEFGAF VTLEGVMGRV EGMVHVSSIQ 250 260 270 280 290 300 TGARANSASD LLSRGQQVKV KVMSVAGNRI GLSMKDVDQV SGRDLTPHLR IMSEAELEEE 310 320 330 340 350 360 RVRAARASSG ANALPLRSKD EGPVRSAKRL TSPERWEIKQ LISSGAIDAS EYPDLDEDFN 370 380 390 400 410 420 NPMAHVQVEE ELDVEIREDE PPFLAGQTKR TLDLSPVKIV KAPDGSLNRA ALAGASLAKE 430 440 450 460 470 480 RRELRQQEAN EEADSQARDF SQPWLDPMSK ETDKMFAQDL RGNLKGQKAG EVPSWKQQSF 490 500 510 520 530 540 NKATTFGEIT SLSIQDQRKS LPIYKLRDPL LKAIEEHQVL IVVGDTGSGK TTQMVQYLAE 550 560 570 580 590 600 SGYAERGRIG CTQPRRVAAM SVAKRVSEEV GCRLGQEVGY TIRFEDCTSP ETRIKYMTDG 610 620 630 640 650 660 MLQRECLIDP LCSSYSVVML DEAHERTIAT DVLFGLLKKA VKRRPDLKLI VTSATLDAEK 670 680 690 700 710 720 FSKYFFGCPI FTIPGRTYPV EILYTKEPES DYLDASLITV MQIHLSEPPG DILLFLTGQE 730 740 750 760 770 780 EIDTACEILF ERMKALGPKV PELLILPIYS ALPSEVQSRV FEPTPPGARK VVIATNVAET 790 800 810 820 830 840 SLTIPGIYYV IDPGFSKQNA YDPKLGMDSL VVMPISQAQA RQRSGRAGRT GPGKCYRLYT 850 860 870 880 890 900 EAAYRNEMLP NSIPDIQRTN LAATILQLKA MGVNDLLSFD FMDPPPAPTM LTALESLYAL 910 920 930 940 950 960 SALDDEGLLT RLGRKMADFP MEPPLAKMLI ASVELGCSEE ILSIVAMLSV QSVFYRPKEK 970 980 990 1000 1010 1020 QGQADSKKAK FHQPEGDHLT LLTVYNGWKA ANFSNPWCYE NFIQARSMRR AQDVRKQLLG 1030 1040 1050 1060 1070 1080 IMDRYKHDIL SAGRDYNRVR KAICSGFFRN AAKKDPQEGY KTLVEGTPVY IHPSSALFNR 1090 1100 1110 1120 1130 1140 NPEWLVYHEL VLTTREYCHN VTAVEPKWLV EVAPQFFKVA DANKISKRKR QEKIEPLFNK 1150 1160 YEKPDEWRLS KIKRSARSSQ TFG

References

[1]

"The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis." Martin F., Aerts A., Ahren D., Brun A., Danchin E.G.J., Duchaussoy F., Gibon J., Kohler A., Lindquist E., Pereda V., Salamov A., Shapiro H.J., Wuyts J., Blaudez D., Buee M., Brokstein P., Canbaeck B., Cohen D. , Courty P.E., Coutinho P.M., Delaruelle C., Detter J.C., Deveau A., DiFazio S., Duplessis S., Fraissinet-Tachet L., Lucic E., Frey-Klett P., Fourrey C., Feussner I., Gay G., Grimwood J., Hoegger P.J., Jain P., Kilaru S., Labbe J., Lin Y.C., Legue V., Le Tacon F., Marmeisse R., Melayah D., Montanini B., Muratet M., Nehls U., Niculita-Hirzel H., Oudot-Le Secq M.P., Peter M., Quesneville H., Rajashekar B., Reich M., Rouhier N., Schmutz J., Yin T., Chalot M., Henrissat B., Kuees U., Lucas S., Van de Peer Y., Podila G.K., Polle A., Pukkila P.J., Richardson P.M., Rouze P., Sanders I.R., Stajich J.E., Tunlid A., Tuskan G., Grigoriev I.V. Nature 452:88-92(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 / ATCC MYA-4686.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS547091 Genomic DNA. Translation: EDR15839.1.
RefSeq	XP_001874047.1. XM_001874012.1.
3D structure databases
ProteinModelPortal	B0CRL8.
SMR	B0CRL8. Positions 197-290.
ModBase	Search...
Protein-protein interaction databases
STRING	29883.JGI301208.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6069452.
KEGG	lbc:LACBIDRAFT_301208.
Phylogenomic databases
KO	K12818.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR011545. DNA/RNA_helicase_DEAD/DEAH_N. IPR002464. DNA/RNA_helicase_DEAH_CS. IPR011709. DUF1605. IPR007502. Helicase-assoc_dom. IPR014001. Helicase_ATP-bd. IPR001650. Helicase_C. IPR012340. NA-bd_OB-fold. IPR003029. Rbsml_prot_S1_RNA-bd_dom. IPR022967. RNA-binding_domain_S1. [Graphical view]
Pfam	PF00270. DEAD. 1 hit. PF04408. HA2. 1 hit. PF00271. Helicase_C. 1 hit. PF07717. OB_NTP_bind. 1 hit. PF00575. S1. 1 hit. [Graphical view]
SMART	SM00487. DEXDc. 1 hit. SM00847. HA2. 1 hit. SM00490. HELICc. 1 hit. SM00316. S1. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00690. DEAH_ATP_HELICASE. 1 hit. PS51192. HELICASE_ATP_BIND_1. 1 hit. PS51194. HELICASE_CTER. 1 hit. PS50126. S1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0CRL8_LACBS

Accession

Primary (citable) accession number: B0CRL8

Entry history

Integrated into UniProtKB/TrEMBL:	February 26, 2008
Last sequence update:	February 26, 2008
Last modified:	April 3, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)