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Protein

DNA ligase

Gene

LACBIDRAFT_187450

Organism
Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n)-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)(m) = (deoxyribonucleotide)(n+m) + AMP + diphosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseUniRule annotation
Biological processDNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation
LigandATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:LACBIDRAFT_187450Imported
OrganismiLaccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor)Imported
Taxonomic identifieri486041 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesTricholomataceaeLaccaria
Proteomesi
  • UP000001194 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi486041.XP_001873189.1

Structurei

3D structure databases

ProteinModelPortaliB0CPS5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini545 – 682DNA_LIGASE_A3InterPro annotationAdd BLAST138

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0967 Eukaryota
COG1793 LUCA
InParanoidiB0CPS5
KOiK10747
OrthoDBiEOG092C0FHN

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR000977 DNA_ligase_ATP-dep
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00574 dnl1, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS00333 DNA_LIGASE_A2, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

B0CPS5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRQQTLAKF FDMPKSVKTP PPQQASLKEM WGKRPIVTKT EEEDEKQDAM
60 70 80 90 100
DIEPGNNSKA GSSKRTGALT RPGRSPKLKK RKIVQSNDEQ EEQPKRSTTA
110 120 130 140 150
VVVESGKPTS DDPATFSSQS LKRKQKESVD AVEDMDAAAS AGEGEEEVEN
160 170 180 190 200
DDSDMEVDDG VVSVSAQAAL RRKGEVDVKG GWKVGEPVLY AALTKAFSLI
210 220 230 240 250
EATTKRLEKT AILTSFLLLV IQRSAKADHN SLLQAVYLCI NRLSPDYVGV
260 270 280 290 300
ELGIGESLLI KAIAESTGRS LSLIKADLKR EGDLGLVAMN SKNSQKTLFK
310 320 330 340 350
PKPLTLPFVF SNLRDIALTT GNSSQAKKVS VITKLLAACQ DFEAKYIVRS
360 370 380 390 400
LEGKLRIGNA ERSVLVALAQ AVVLAEKEKV GKKWSQEKLT ARLEEGANII
410 420 430 440 450
KAVYSELPSY DKVIPALLEV GIDGLRDKCK LTPGVPLKPM LAKPTKAIGE
460 470 480 490 500
VLDRFENKRF TCEYKYDGER AQVHKLEDGT VDVFSRNSED MSKKYPDLVD
510 520 530 540 550
QLPRCIKEST KSFVLDAEAV AIDRLTGKLM PFQELSRRKR KDVKVEDIQV
560 570 580 590 600
QVCLFAFDLL YLNGEPLLQR PLYERRELLR QYFTPVPGEF DFAKSSDSET
610 620 630 640 650
TEEIQTFLEE SVKDGCEGLM VKMLDSDASY YEPSRRSVNW LKLKKDYLAG
660 670 680 690 700
VGDSLDLVVV GGYYGKGKRT NVYGAFLLAC YDSESEEYQT ICKIGTGFSE
710 720 730 740 750
ENLQAHYDAL KPLETTKVRG DIKVGGAKPD IWFEPKIVWE VLTADLSLSP
760 770 780 790 800
IYTAAQGLVE DRGISLRFPR FIRVRDDKGP DDATGPEQIA EMYERQALAQ
810
SNGKKKKGGD ADDGFW
Length:816
Mass (Da):90,576
Last modified:February 26, 2008 - v1
Checksum:i11389A672A9FBFF2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS547091 Genomic DNA Translation: EDR14981.1
RefSeqiXP_001873189.1, XM_001873154.1

Genome annotation databases

EnsemblFungiiEDR14981; EDR14981; LACBIDRAFT_187450
GeneIDi6068938
KEGGilbc:LACBIDRAFT_187450

Similar proteinsi

Entry informationi

Entry nameiB0CPS5_LACBS
AccessioniPrimary (citable) accession number: B0CPS5
Entry historyiIntegrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: May 23, 2018
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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