B0CNR0 (B0CNR0_LACBS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EDR15343.1

Gene names

ORF Names:

LACBIDRAFT_228351 EMBL EDR15343.1

Organism

Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor) [Complete proteome]

Taxonomic identifier

486041 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Basidiomycota › Agaricomycotina › Agaricomycetes › Agaricomycetidae › Agaricales › Tricholomataceae › Laccaria › Laccaria bicolor

Protein attributes

Sequence length	396 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	isoprenoid biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro diphosphomevalonate decarboxylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0CNR0 [UniParc]. Last modified February 26, 2008. Version 1. Checksum: 1DDDDE226FDEE6A4	FASTA	396	42,546
	10 20 30 40 50 60 MSTVYQATAS APVNIAVIKY WGKRDTKLIL PTNSSLSVTL DQDHLRSTTT SRADPSFVKD 70 80 90 100 110 120 TLWLNGKEDE IKPGGRLATC ISELKRLRQA TVENEDPSAP KLSTYKVHIA SYNNFPTAAG 130 140 150 160 170 180 LASSASGFAA LVASLAQLYA LPVSPSTLSI IARQGSGSAC RSLYGGFVAW QEGVLPDGSD 190 200 210 220 230 240 SLAVQVAPQS HWPEIHALIC VVSDDKKGTS STSGMQLTVE TSTLLQHRIK AVVPQRMKDI 250 260 270 280 290 300 SKAILEKDFD TFARITMADS NQFHAVALDT EPPIFYMNDV SRAIIAVIVE YNRLSLANGQ 310 320 330 340 350 360 GYKAAYTYDA GPNAVIYAEE KNIKEIIQLI VSFFPQREGT FKDNLGVFAQ GAEVNAQAAV 370 380 390 PAGFNGLIHT RVGDGPRALG EEEALLGPEG TPKTLA

References

[1]

"The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis." Martin F., Aerts A., Ahren D., Brun A., Danchin E.G.J., Duchaussoy F., Gibon J., Kohler A., Lindquist E., Pereda V., Salamov A., Shapiro H.J., Wuyts J., Blaudez D., Buee M., Brokstein P., Canbaeck B., Cohen D. , Courty P.E., Coutinho P.M., Delaruelle C., Detter J.C., Deveau A., DiFazio S., Duplessis S., Fraissinet-Tachet L., Lucic E., Frey-Klett P., Fourrey C., Feussner I., Gay G., Grimwood J., Hoegger P.J., Jain P., Kilaru S., Labbe J., Lin Y.C., Legue V., Le Tacon F., Marmeisse R., Melayah D., Montanini B., Muratet M., Nehls U., Niculita-Hirzel H., Oudot-Le Secq M.P., Peter M., Quesneville H., Rajashekar B., Reich M., Rouhier N., Schmutz J., Yin T., Chalot M., Henrissat B., Kuees U., Lucas S., Van de Peer Y., Podila G.K., Polle A., Pukkila P.J., Richardson P.M., Rouze P., Sanders I.R., Stajich J.E., Tunlid A., Tuskan G., Grigoriev I.V. Nature 452:88-92(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 / ATCC MYA-4686.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS547091 Genomic DNA. Translation: EDR15343.1.
RefSeq	XP_001873551.1. XM_001873516.1.
3D structure databases
ProteinModelPortal	B0CNR0.
SMR	B0CNR0. Positions 4-390.
ModBase	Search...
Protein-protein interaction databases
STRING	29883.JGI228351.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6069617.
KEGG	lbc:LACBIDRAFT_228351.
Phylogenomic databases
KO	K01597.
Family and domain databases
Gene3D	3.30.230.10. 1 hit.
InterPro	IPR006204. GHMP_kinase_N_dom. IPR005935. Mev_diP_decarb. IPR020568. Ribosomal_S5_D2-typ_fold. IPR014721. Ribosomal_S5_D2-typ_fold_subgr. [Graphical view]
PANTHER	PTHR10977. PTHR10977. 1 hit.
Pfam	PF00288. GHMP_kinases_N. 1 hit. [Graphical view]
PIRSF	PIRSF015950. Mev_P_decrbx. 1 hit.
SUPFAM	SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
TIGRFAMs	TIGR01240. mevDPdecarb. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B0CNR0_LACBS

Accession

Primary (citable) accession number: B0CNR0

Entry history

Integrated into UniProtKB/TrEMBL:	February 26, 2008
Last sequence update:	February 26, 2008
Last modified:	April 3, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)