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B0CNN5

- B0CNN5_LACBS

UniProt

B0CNN5 - B0CNN5_LACBS

Protein
Submitted name:

Glycoside hydrolase family 47 protein

Gene

LACBIDRAFT_228999

Organism
Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (26 Feb 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro
    2. mannosyl-oligosaccharide 1,2-alpha-mannosidase activity Source: InterPro

    Keywords - Molecular functioni

    HydrolaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glycoside hydrolase family 47 proteinImported
    Gene namesi
    ORF Names:LACBIDRAFT_228999Imported
    OrganismiLaccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor)Imported
    Taxonomic identifieri486041 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesTricholomataceaeLaccaria
    ProteomesiUP000001194: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi29883.JGI228999.

    Structurei

    3D structure databases

    ProteinModelPortaliB0CNN5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01230.
    OrthoDBiEOG75TMND.

    Family and domain databases

    Gene3Di1.50.10.50. 1 hit.
    InterProiIPR001382. Glyco_hydro_47.
    [Graphical view]
    PANTHERiPTHR11742. PTHR11742. 1 hit.
    PfamiPF01532. Glyco_hydro_47. 1 hit.
    [Graphical view]
    PRINTSiPR00747. GLYHDRLASE47.
    SUPFAMiSSF48225. SSF48225. 1 hit.

    Sequencei

    Sequence statusi: Fragment.

    B0CNN5-1 [UniParc]FASTAAdd to Basket

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    TYVPADIPKR DAVVKAFKHA WHAYERDAMG DDEYHPIEQK GSNLTKAGGI    50
    GYMVIDVLDT MQLMGLKEEY ARSRNWVQSK LSFDRDDRFS TFETTIRVLG 100
    GLLSAYHLSN HDPLYLEKAV ELADRILPVF DTPSGLPLPV INLATMEPSH 150
    MDDFPGLVSV AEAGTLQLEF RYLSHLTGND VYWRKVEKVM RVIKDARLPH 200
    GLASIFLNID RGQYESSAIR LGARADSFYE YLLKQYLQTN KSEVVYRDMY 250
    DDAMTAIHSY LIQESKNAKM TYTSELIPEH HEDGEISWRL TPKQDHLVCF 300
    LGGSLMLGAT HTGTVTQQPV SIPPRPEELA ENGRRDWKTG VELIKTCMNT 350
    HDTASGLSPE IVYFRVPSDG MDGYDIAPSD WYIRGAQEGE FPPYDARYML 400
    RPETIESLFL AYRLTGDPIY QDHAWAIFQS IEKHCRVPTG GYATIINVDE 450
    NPARQEDKME TFFLSETLKY LYLLFSDSDV VPLDKYVFNT EAHPLPVFTP 500
    IIWMGFS 507
    Length:507
    Mass (Da):57,801
    Last modified:February 26, 2008 - v1
    Checksum:i4533D21A4EA36B38
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS547091 Genomic DNA. Translation: EDR15965.1.
    RefSeqiXP_001874173.1. XM_001874138.1.

    Genome annotation databases

    GeneIDi6068992.
    KEGGilbc:LACBIDRAFT_228999.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS547091 Genomic DNA. Translation: EDR15965.1 .
    RefSeqi XP_001874173.1. XM_001874138.1.

    3D structure databases

    ProteinModelPortali B0CNN5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 29883.JGI228999.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 6068992.
    KEGGi lbc:LACBIDRAFT_228999.

    Phylogenomic databases

    KOi K01230.
    OrthoDBi EOG75TMND.

    Family and domain databases

    Gene3Di 1.50.10.50. 1 hit.
    InterProi IPR001382. Glyco_hydro_47.
    [Graphical view ]
    PANTHERi PTHR11742. PTHR11742. 1 hit.
    Pfami PF01532. Glyco_hydro_47. 1 hit.
    [Graphical view ]
    PRINTSi PR00747. GLYHDRLASE47.
    SUPFAMi SSF48225. SSF48225. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis."
      Martin F., Aerts A., Ahren D., Brun A., Danchin E.G.J., Duchaussoy F., Gibon J., Kohler A., Lindquist E., Pereda V., Salamov A., Shapiro H.J., Wuyts J., Blaudez D., Buee M., Brokstein P., Canbaeck B., Cohen D.
      , Courty P.E., Coutinho P.M., Delaruelle C., Detter J.C., Deveau A., DiFazio S., Duplessis S., Fraissinet-Tachet L., Lucic E., Frey-Klett P., Fourrey C., Feussner I., Gay G., Grimwood J., Hoegger P.J., Jain P., Kilaru S., Labbe J., Lin Y.C., Legue V., Le Tacon F., Marmeisse R., Melayah D., Montanini B., Muratet M., Nehls U., Niculita-Hirzel H., Oudot-Le Secq M.P., Peter M., Quesneville H., Rajashekar B., Reich M., Rouhier N., Schmutz J., Yin T., Chalot M., Henrissat B., Kuees U., Lucas S., Van de Peer Y., Podila G.K., Polle A., Pukkila P.J., Richardson P.M., Rouze P., Sanders I.R., Stajich J.E., Tunlid A., Tuskan G., Grigoriev I.V.
      Nature 452:88-92(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S238N-H82 / ATCC MYA-4686Imported.

    Entry informationi

    Entry nameiB0CNN5_LACBS
    AccessioniPrimary (citable) accession number: B0CNN5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 26, 2008
    Last sequence update: February 26, 2008
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3