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B0CFL6 (B0CFL6_ACAM1) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Asparagine--tRNA ligase HAMAP MF_00534
EC=6.1.1.22 HAMAP MF_00534
Alternative name(s):
Asparaginyl-tRNA synthetase HAMAP MF_00534
Gene names
Name:asnS HAMAP MF_00534 EMBL ABW27035.1
Ordered Locus Names:AM1_2020
OrganismAcaryochloris marina (strain MBIC 11017) [Complete proteome] [HAMAP]
Taxonomic identifier329726 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Acaryochloris

Protein attributes

Sequence length463 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn). HAMAP MF_00534 SAAS SAAS004522

Subunit structure

Homodimer By similarity. HAMAP MF_00534

Subcellular location

Cytoplasm By similarity HAMAP MF_00534.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00534 RuleBase RU003746

Sequences

Sequence LengthMass (Da)Tools
B0CFL6 [UniParc].

Last modified February 26, 2008. Version 1.
Checksum: 6710B44D8307313E

FASTA46353,073
        10         20         30         40         50         60 
MEIRRIIELL RHGTPGESIK VQGWVRTKRE LKEFAFLDVN DGSSLQGLQV VVNQNLPEYE 

        70         80         90        100        110        120 
QTLKLLNTGS SVSIEGELVA SQGKNQRVEL VAKAVQVWGT ADLETYPLQK KRHSFEFLRT 

       130        140        150        160        170        180 
IAHLRSRTNT LGSVFRIRNA CSQAIHQFFQ DRDFMWIHTP IITASDCEGA GEQLAVTSLN 

       190        200        210        220        230        240 
LQDVPLSEDQ TVDYSQDFFG KPTYLTVSGQ LEGEIMASAF CNVYTFGPTF RAENSNTSRH 

       250        260        270        280        290        300 
LAEFWMVEPE VAFCDLQGDM DLAEAFLKHV FKSVLEQCPE DFEFFNLRID KSVLETADTI 

       310        320        330        340        350        360 
INSEFERITY TEAVNQLEKA SRKFEFPVEW GLDLQSEHER YLSEELFKKP VIVTDYPKQI 

       370        380        390        400        410        420 
KAFYMRMNDD DKTVAAMDVL VPKIGEIIGG SQREERLDLL EQRIVAQGLP LEDYWWYLDL 

       430        440        450        460 
RRYGTVPHAG FGLGFERLVQ FMTGMANIRD VIPFPRTPLN AEF

« Hide

References

[1]"Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina."
Swingley W.D., Chen M., Cheung P.C., Conrad A.L., Dejesa L.C., Hao J., Honchak B.M., Karbach L.E., Kurdoglu A., Lahiri S., Mastrian S.D., Miyashita H., Page L., Ramakrishna P., Satoh S., Sattley W.M., Shimada Y., Taylor H.L. expand/collapse author list , Tomo T., Tsuchiya T., Wang Z.T., Raymond J., Mimuro M., Blankenship R.E., Touchman J.W.
Proc. Natl. Acad. Sci. U.S.A. 105:2005-2010(2008) [PubMed: 18252824] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000828 Genomic DNA. Translation: ABW27035.1.
RefSeqYP_001516349.1. NC_009925.1.

3D structure databases

ProteinModelPortalB0CFL6.
ModBaseSearch...

Protein-protein interaction databases

STRINGB0CFL6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5680834.
GenomeReviewsGene locus AM1_2020 in contig CP000828_GR.
KEGGamr:AM1_2020.
PATRIC20618384. VBIAcaMar40141_1828.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG745843.
OMAAIHRFFH.
PhylomeDBB0CFL6.
ProtClustDBPRK03932.

Family and domain databases

HAMAPMF_00534. Asn_tRNA_synth.
[Tree]
InterProIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004522. Asn-tRNA-synth_IIb.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR012340. NA-bd_OB-fold.
IPR016027. NA-bd_OB-fold-like.
IPR004365. NA-bd_OB_tRNA-helicase.
[Graphical view]
Gene3DG3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KOK01893.
PANTHERPTHR22594. aa-tRNA-synt_II. 1 hit.
PTHR22594:SF6. PTHR22594:SF6. 1 hit.
PfamPF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti. 1 hit.
[Graphical view]
PRINTSPR01042. TRNASYNTHASP.
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR00457. AsnS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0CFL6_ACAM1
AccessionPrimary (citable) accession number: B0CFL6
Entry history
Integrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: January 25, 2012
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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