B0CD80 (B0CD80_ACAM1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase, catalytic region EMBL ABW25671.1

Gene names

Ordered Locus Names:

AM1_0622

Organism

Acaryochloris marina (strain MBIC 11017) [Complete proteome] [HAMAP]

Taxonomic identifier

329726 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Acaryochloris

Protein attributes

Sequence length	486 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0CD80 [UniParc]. Last modified February 26, 2008. Version 1. Checksum: B3792B70A2930BC4	FASTA	486	55,175
	10 20 30 40 50 60 MQINTPDWVK NAVFYQIFPD RFACHPHPSI PSQVNWEAWH APPTFQGYKG GNLWGIIDRL 70 80 90 100 110 120 DYLADLGITA LYLTPIFQSA CNHRYHTHDY YQVDPILGGN EALTDLLTAA HKRHIKVVLD 130 140 150 160 170 180 GVFNHASRGF FFFNDILENG PHSPWVDWFR IEGWPVAAYQ GSKPANYVGW SGNRALPQFN 190 200 210 220 230 240 HDHPDVREYI MQIAEYWIKQ GVDGWRLDVP NEIEVPGFWQ EFRDRVKGIN SEAYIVGEIW 250 260 270 280 290 300 DNAQPWLQGD QFDGVMNYQF RQATIAFTAG DRVDVAYTTQ PAYAPYPALD ASDYQQRIQD 310 320 330 340 350 360 LLTWYPWDIQ LTQLNLLSSH DTARLLSMVH LDYSTIELAT LLLLTFPGAP CIYYGDEVGL 370 380 390 400 410 420 PGGIDPDCRR SFPEEADWHL PLQTIHKQLI QIRHQHAALR TGQYQVLLAT DEAYVFSRSL 430 440 450 460 470 480 AEEVMIVAIN TSTKSSSLTI DLSPLSPSIA KLDSIYGTPN VLAINTNTAT VELSARQGSI MIASFE

References

[1]

"Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina." Swingley W.D., Chen M., Cheung P.C., Conrad A.L., Dejesa L.C., Hao J., Honchak B.M., Karbach L.E., Kurdoglu A., Lahiri S., Mastrian S.D., Miyashita H., Page L., Ramakrishna P., Satoh S., Sattley W.M., Shimada Y., Taylor H.L. , Tomo T., Tsuchiya T., Wang Z.T., Raymond J., Mimuro M., Blankenship R.E., Touchman J.W. Proc. Natl. Acad. Sci. U.S.A. 105:2005-2010(2008) [PubMed: 18252824] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000828 Genomic DNA. Translation: ABW25671.1.
RefSeq	YP_001514985.1. NC_009925.1.
3D structure databases
ProteinModelPortal	B0CD80.
ModBase	Search...
Protein-protein interaction databases
STRING	B0CD80.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5679450.
GenomeReviews	Gene locus AM1_0622 in contig CP000828_GR.
KEGG	amr:AM1_0622.
PATRIC	20615770. VBIAcaMar40141_0536.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG726713.
OMA	ETVWYQI.
PhylomeDB	B0CD80.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B0CD80_ACAM1

Accession

Primary (citable) accession number: B0CD80

Entry history

Integrated into UniProtKB/TrEMBL:	February 26, 2008
Last sequence update:	February 26, 2008
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)