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B0CD40 (B0CD40_ACAM1) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:AM1_0582 EMBL ABW25631.1
OrganismAcaryochloris marina (strain MBIC 11017) [Complete proteome] [HAMAP] EMBL ABW25631.1
Taxonomic identifier329726 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesAcaryochloris

Protein attributes

Sequence length1197 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B0CD40 [UniParc].

Last modified February 26, 2008. Version 1.
Checksum: A98F875DEC391AAA

FASTA1,197134,320
        10         20         30         40         50         60 
MSVIQQFWNQ LTIVPRQLSL GLKTLLDQLE SPTLALPEVA QSQATGNHFL LAYQKLADLD 

        70         80         90        100        110        120 
SQHLSLSERL QKSVEILSET LGFAIVVLDF YDPSQQTLQF QAGTITHLNH EDEGTLQRLN 

       130        140        150        160        170        180 
HQASQVLGAS RPLVLVDDQG VTNQTHLASY LPPSALLKTV LQLPLATNHT VLGMLTLGSP 

       190        200        210        220        230        240 
ELLPDANMLC LWGKQVASFL AWLIQAERAN TCFNNVQERF SLVASSFRGC FYDWDIAIDS 

       250        260        270        280        290        300 
ILQFTKTNEE QAAKPHAPRQ FSVPEWLDQI HPEDRHLLET LIDQDFQGED QFELEYRWQS 

       310        320        330        340        350        360 
DGQPFMCDRG VIQRDAQGVP IRVVGVLTNI ADFKRLEENA QQQIDHYQTL LADISIVIFK 

       370        380        390        400        410        420 
TDLAGHWTYL NPAWSKLTGI SLEDSLGKPI WDFVHPDDRP GLQEAFHNLV EQTSESYNHE 

       430        440        450        460        470        480 
LRFFCQQGGC AWVVVHNHVI RAEDGTCIGT AGTLEDASER KQTEQALLHD ALHDGLTQLP 

       490        500        510        520        530        540 
NRVLFMDRLE QACRSFQRHP DEIFAVLFLD LDRFKIINDT LGHMVGDQLL VAVAHRLQTC 

       550        560        570        580        590        600 
LRPEDTVARL GGDEFTLLLP NIDQAEDAMH ISDRILQSLK EPFTLDHTEV FITVSIGIAM 

       610        620        630        640        650        660 
SGNPEQKPDD LLRHADIALY RAKANGKGCY AVFSPEMPLQ PLAQVQIETE VRQALDDEEF 

       670        680        690        700        710        720 
RLYCQPVHSL ENNEVWGFTL QMYWQHPHKG VLPSFEFLPS VTDTGLQRSL GWWVLRKACA 

       730        740        750        760        770        780 
QLHQWQRMPT EQPLSIWVAV SEAQLTSSNF LSKFERLLEK HDINPQHLVL ELPPSLWPRP 

       790        800        810        820        830        840 
SKKVLAHLQD VHSRGVQLAR VQDNQDFDWL SGEESLPVDW VKLSSTLLGN LDQQGYLESI 

       850        860        870        880        890        900 
HSLFILAASA EIKMLADGIQ TPKQRLLMSA LKCDYGQGHN FTDPIPAHAA DPWLEPSYSQ 

       910        920        930        940        950        960 
PLDSMNPSSS MSLLIIYSPI GQSQVPLVGK QSWTIGRSPD NSIVLPDRWA SRNHAQLRAT 

       970        980        990       1000       1010       1020 
DAGEFFLIDL GSGNGSVVNG ERVTMPVALK DGDLITIGHS QLEFHHRTRE SALSAIETAP 

      1030       1040       1050       1060       1070       1080 
KNVLMMQASH MQGQVWKEAL SSQGISLTWL NENIDLAQYL TQSIKSGQGV PDLLLLDMTI 

      1090       1100       1110       1120       1130       1140 
LKPNPYSFCR WCHNLHPTLK IILTSGTRTF VPASERKWAT HQGASELIAA FDEGSIFSNL 

      1150       1160       1170       1180       1190 
IDVMAKVRVV LATINWRPIE QGSLSSALLA IKPSLTTSTF NSRQTIIGEL PADLEST 

« Hide

References

[1]"Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina."
Swingley W.D., Chen M., Cheung P.C., Conrad A.L., Dejesa L.C., Hao J., Honchak B.M., Karbach L.E., Kurdoglu A., Lahiri S., Mastrian S.D., Miyashita H., Page L., Ramakrishna P., Satoh S., Sattley W.M., Shimada Y., Taylor H.L. expand/collapse author list , Tomo T., Tsuchiya T., Wang Z.T., Raymond J., Mimuro M., Blankenship R.E., Touchman J.W.
Proc. Natl. Acad. Sci. U.S.A. 105:2005-2010(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MBIC 11017.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000828 Genomic DNA. Translation: ABW25631.1.
RefSeqYP_001514945.1. NC_009925.1.

3D structure databases

ProteinModelPortalB0CD40.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING329726.AM1_0582.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABW25631; ABW25631; AM1_0582.
GeneID5679409.
KEGGamr:AM1_0582.
PATRIC20615690. VBIAcaMar40141_0497.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
OrthoDBEOG6SR96T.

Enzyme and pathway databases

BioCycAMAR329726:GCZJ-574-MONOMER.

Family and domain databases

Gene3D2.60.200.20. 1 hit.
3.20.20.450. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR000253. FHA_dom.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
IPR008984. SMAD_FHA_domain.
[Graphical view]
PfamPF00563. EAL. 1 hit.
PF00498. FHA. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 2 hits.
[Graphical view]
SMARTSM00052. EAL. 1 hit.
SM00240. FHA. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
SSF49879. SSF49879. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEPS50883. EAL. 1 hit.
PS50006. FHA_DOMAIN. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB0CD40_ACAM1
AccessionPrimary (citable) accession number: B0CD40
Entry history
Integrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: June 11, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)