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Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase with GAF domain

Gene

AM1_0548

Organism
Acaryochloris marina (strain MBIC 11017)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciAMAR329726:GCZJ-541-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesterase with GAF domainImported
Gene namesi
Ordered Locus Names:AM1_0548Imported
OrganismiAcaryochloris marina (strain MBIC 11017)Imported
Taxonomic identifieri329726 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesAcaryochloris
ProteomesiUP000000268 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi329726.AM1_0548.

Structurei

3D structure databases

ProteinModelPortaliB0CC56.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2203.
HOGENOMiHOG000035301.
OMAiPLWEDFR.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 2 hits.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF13185. GAF_2. 1 hit.
PF13492. GAF_3. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 2 hits.
SM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 2 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0CC56-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDFATNPLD RQSELTELGQ KALSGFSLTD LYLDAIALMS HHLPISDCSL
60 70 80 90 100
WQVLSDSNTL RLVAKQKASL LGDSTDIDSR DYPWLQTLMQ TGQTAVIARQ
110 120 130 140 150
SEQLPLTQPH GISGLCIPIP GPDRPLGLLE ILTPDPQNWN KEDRNFVNCV
160 170 180 190 200
AQVLATAIQR KRSEMLLQTQ TQILENVATG QGLDAILNSL CLLIESQSPG
210 220 230 240 250
TVCSILLRDA HQPELRMGAG PSLSSEVAAA FDHLIIAENA GSCGTAAFRG
260 270 280 290 300
QAVYVEDTQR DPVWVDFREF AQQHNILACW STPFFSQSGD LLGTFALSHQ
310 320 330 340 350
VPCSPTAHHL NIIKTATHLA SIAMEGHRTA EQLKQKALFD NLTGLPSRDY
360 370 380 390 400
FYEQLQRKLQ QVQRQQLEGY SRQAELCHFA ILFLDVDHFK LVNDSLGHSV
410 420 430 440 450
GDQLLVAIAQ QLKESLRPQD LLARLGGDEF AILLDGVVNH QQAHKIVQRI
460 470 480 490 500
QRSLAKPLKL NQQEVFTSVS IGITHSTSLY QHPEELLRDA DTAMYRAKAH
510 520 530 540 550
GRGGYVVFDE TMHKQVRSRL WLGNSLRYAV KAIEQGQNPF LLQYQPIFCL
560 570 580 590 600
RQQRLIGFEA LLRWHHPQQG LISPEKFIPV AEETGLIIPL GQWVLKAACQ
610 620 630 640 650
QLAVWEQEFS VPLTMSINVS SQQFLQPNFV QSVESLMQSH QLAGHHLKLE
660 670 680 690 700
ITETVLMEST HYVTDRLEQL QNLGISLSLD DFGTGYSSLN YLYNLPINTL
710 720 730 740 750
KIDRSFVWGI GQGQDQIVKT IIALAHGLEM NVVAEGIETI EQMQYLHTLG
760 770 780
CELGQGYWFA RPLQPEAAQQ VIATLSSPMS LSLPIAE
Length:787
Mass (Da):87,821
Last modified:February 26, 2008 - v1
Checksum:i701D48E2A86D0765
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000828 Genomic DNA. Translation: ABW25598.1.
RefSeqiWP_012161199.1. NC_009925.1.
YP_001514912.1. NC_009925.1.

Genome annotation databases

EnsemblBacteriaiABW25598; ABW25598; AM1_0548.
KEGGiamr:AM1_0548.
PATRICi20615630. VBIAcaMar40141_0467.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000828 Genomic DNA. Translation: ABW25598.1.
RefSeqiWP_012161199.1. NC_009925.1.
YP_001514912.1. NC_009925.1.

3D structure databases

ProteinModelPortaliB0CC56.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi329726.AM1_0548.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABW25598; ABW25598; AM1_0548.
KEGGiamr:AM1_0548.
PATRICi20615630. VBIAcaMar40141_0467.

Phylogenomic databases

eggNOGiCOG2203.
HOGENOMiHOG000035301.
OMAiPLWEDFR.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciAMAR329726:GCZJ-541-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 2 hits.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF13185. GAF_2. 1 hit.
PF13492. GAF_3. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 2 hits.
SM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 2 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MBIC 11017Imported.

Entry informationi

Entry nameiB0CC56_ACAM1
AccessioniPrimary (citable) accession number: B0CC56
Entry historyi
Integrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: April 1, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.