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Protein

Chaperone protein ClpB

Gene

clpB

Organism
Acaryochloris marina (strain MBIC 11017)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionChaperoneUniRule annotationSAAS annotation
Biological processStress responseUniRule annotation
LigandATP-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Chaperone protein ClpBUniRule annotation
Gene namesi
Name:clpBUniRule annotationImported
Ordered Locus Names:AM1_0402Imported
OrganismiAcaryochloris marina (strain MBIC 11017)Imported
Taxonomic identifieri329726 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesAcaryochloridaceaeAcaryochloris
Proteomesi
  • UP000000268 Componenti: Chromosome

Subcellular locationi

B0CAW9:
  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiB0CAW9.

Interactioni

Subunit structurei

Homohexamer. The oligomerization is ATP-dependent.SAAS annotation
Homohexamer; The oligomerization is ATP-dependent.UniRule annotation

Protein-protein interaction databases

STRINGi329726.AM1_0402.

Structurei

3D structure databases

ProteinModelPortaliB0CAW9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini199 – 343AAAInterPro annotationAdd BLAST145
Domaini610 – 752AAAInterPro annotationAdd BLAST143
Domaini780 – 869ClpB_D2-smallInterPro annotationAdd BLAST90

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili508 – 535UniRule annotationAdd BLAST28

Sequence similaritiesi

Belongs to the ClpA/ClpB family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilUniRule annotation, RepeatSAAS annotation

Phylogenomic databases

eggNOGiENOG4105C2Z. Bacteria.
COG0542. LUCA.
HOGENOMiHOG000218210.
KOiK03695.
OMAiEIRVEMN.
OrthoDBiPOG091H019M.

Family and domain databases

Gene3Di1.10.1780.10. 1 hit.
InterProiView protein in InterPro
IPR003593. AAA+_ATPase.
IPR003959. ATPase_AAA_core.
IPR017730. Chaperonin_ClpB.
IPR019489. Clp_ATPase_C.
IPR004176. Clp_N.
IPR036628. Clp_N_dom_sf.
IPR001270. ClpA/B.
IPR018368. ClpA/B_CS1.
IPR028299. ClpA/B_CS2.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00004. AAA. 1 hit.
PF07724. AAA_2. 1 hit.
PF02861. Clp_N. 2 hits.
PF10431. ClpB_D2-small. 1 hit.
PRINTSiPR00300. CLPPROTEASEA.
SMARTiView protein in SMART
SM00382. AAA. 2 hits.
SM01086. ClpB_D2-small. 1 hit.
SUPFAMiSSF52540. SSF52540. 2 hits.
SSF81923. SSF81923. 1 hit.
TIGRFAMsiTIGR03346. chaperone_ClpB. 1 hit.
PROSITEiView protein in PROSITE
PS00870. CLPAB_1. 1 hit.
PS00871. CLPAB_2. 1 hit.

Sequencei

Sequence statusi: Complete.

B0CAW9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQPTDPDKFT DKVWTAIVKS QDVARRFSNN KLEVEHLTIS LLEEEPLANK
60 70 80 90 100
ILNKAKVDFE QILQQLTAFA ERQTKVAEGT ALFLGPGLDR LLDQADALRQ
110 120 130 140 150
DRGDQFISVD HYLLAFAEDA RVGQSLLRDQ GIARTDLEKA IKAMRGTQKV
160 170 180 190 200
ADQESESRYN ALEKYGRDLT ERAKAGKLDP VIGRDDEIRR VIQVLSRRLK
210 220 230 240 250
NNPVLIGEPG VGKTAIAEGL AQRIVNGDVP ESLKNRQLIT LDMGSLIAGA
260 270 280 290 300
KYRGEFEDRL KAVLREVTHS DGQIVLFIDE LHTVVGAGSG QSSMDASNLL
310 320 330 340 350
KPMLSRGELR CIGATTLDEY RKHIEKDAAL ERRFQQVYID QPTVDSAISI
360 370 380 390 400
LRGLKDRYEI HHNVKITDSA LVAAAVLSDR YIADRFLPDK AIDLVDEAAA
410 420 430 440 450
KLKMEMTSKP SELEGIERRV MQLEMEKMSL EQEQKRSSIG GIYESSEDHL
460 470 480 490 500
QRVMAEIEEL LPKRESLEEQ WKTEKQVLEE INSLKEQEAQ VRVEIEKAER
510 520 530 540 550
EFDHEKAVQL TYSRMATLQQ ELEEHEAKLL AIRAQGPTLL REEVTEEDVA
560 570 580 590 600
EVVANWTGIP VSRLLESERQ KLLQLEDHLH ERVIGQEDAV EAVSAAIRRA
610 620 630 640 650
RAGMKDPNRP IGSFMFLGPT GVGKTELARA LAQFLFDTED AIIRIDMSEY
660 670 680 690 700
MEKHAVSRLV GASPGYVGYE EGGQLSEMVR RRPYSVVLLD EVEKAHPEIF
710 720 730 740 750
NILLQVLDDG RITDAQGRTV NFCNTIIVLT SNIGSEHITE ATEEEEQYLE
760 770 780 790 800
MQMKVLEALR SHFRPEFLNR IDEITMFHTL NREQLGSIVK IQLKRIEALL
810 820 830 840 850
AEQKLAIQLS DEALEHIVEA GYDPVYGARP LKRALQRELE NPIATKILEN
860 870 880 890 900
TFTSGDTIMV DWDEDELIFS EAPRATLDMA EAEESEEEES EEEELAPAAS
Length:900
Mass (Da):101,628
Last modified:February 26, 2008 - v1
Checksum:i750CA48EEC0966D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000828 Genomic DNA. Translation: ABW25459.1.
RefSeqiWP_012161069.1. NC_009925.1.

Genome annotation databases

EnsemblBacteriaiABW25459; ABW25459; AM1_0402.
KEGGiamr:AM1_0402.

Similar proteinsi

Entry informationi

Entry nameiB0CAW9_ACAM1
AccessioniPrimary (citable) accession number: B0CAW9
Entry historyiIntegrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: October 25, 2017
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported