B0CAC8 (B0CAC8_ACAM1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Transcription antitermination protein nusG RuleBase RU000538

Gene names

Name:	nusG EMBL ABW27863.1
Ordered Locus Names:	AM1_2864

Organism

Acaryochloris marina (strain MBIC 11017) [Complete proteome] [HAMAP]

Taxonomic identifier

329726 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Acaryochloris

Protein attributes

Sequence length	206 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. SAAS SAAS006645 RuleBase RU000538
Sequence similarities	Belongs to the nusG family. RuleBase RU003559

Ontologies

Keywords
Biological process	Transcription Transcription antitermination SAAS SAAS006645 RuleBase RU000538 Transcription regulation Transcription termination SAAS SAAS006645 RuleBase RU000538
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	positive regulation of transcription elongation from RNA polymerase II promoter Inferred from electronic annotation. Source: InterPro transcription antitermination Inferred from electronic annotation. Source: UniProtKB-KW transcription termination, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0CAC8 [UniParc]. Last modified February 26, 2008. Version 1. Checksum: 2A3DA476A61DF114	FASTA	206	23,400
	10 20 30 40 50 60 MTDDPLSTTP AVSSVPEGPL EIRHWYAVQV ASGCEKKVKH NLEQRLQTLD VADRIVQIEI 70 80 90 100 110 120 PQTPTIKVRK DGSRLTGEEK VFPGYVLVRM ILDDETWQVV KNTPNVINFV GAEQQRRYGR 130 140 150 160 170 180 GRGHVKPMPL SPSEVERIFR QAQEQEPVVK VDMSVGDKIQ VLNGPFKDFE GEVIEVSLER 190 200 NKLKALLSIF GRDTPVELEF NQVRKE

References

[1]

"Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina." Swingley W.D., Chen M., Cheung P.C., Conrad A.L., Dejesa L.C., Hao J., Honchak B.M., Karbach L.E., Kurdoglu A., Lahiri S., Mastrian S.D., Miyashita H., Page L., Ramakrishna P., Satoh S., Sattley W.M., Shimada Y., Taylor H.L. , Tomo T., Tsuchiya T., Wang Z.T., Raymond J., Mimuro M., Blankenship R.E., Touchman J.W. Proc. Natl. Acad. Sci. U.S.A. 105:2005-2010(2008) [PubMed: 18252824] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000828 Genomic DNA. Translation: ABW27863.1.
RefSeq	YP_001517179.1. NC_009925.1.
3D structure databases
ProteinModelPortal	B0CAC8.
ModBase	Search...
Protein-protein interaction databases
STRING	B0CAC8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5681672.
GenomeReviews	Gene locus AM1_2864 in contig CP000828_GR.
KEGG	amr:AM1_2864.
PATRIC	20620012. VBIAcaMar40141_2636.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG751162.
OMA	VASGCEK.
PhylomeDB	B0CAC8.
ProtClustDB	PRK05609.
Family and domain databases
InterPro	IPR005824. KOW. IPR001062. Transcrpt_antiterm_NusG. IPR015869. Transcrpt_antiterm_NusG_bac_CS. IPR006645. Transcrpt_antiterm_NusG_N. IPR014722. Transl_SH3-like_sub. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.30.30.30. Ribosomal_L2. 1 hit. G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KO	K02601.
Pfam	PF00467. KOW. 1 hit. PF02357. NusG. 1 hit. [Graphical view]
PRINTS	PR00338. NUSGTNSCPFCT.
SMART	SM00739. KOW. 1 hit. SM00738. NGN. 1 hit. [Graphical view]
SUPFAM	SSF82679. Transcrpt_antiterm_NusG_N. 1 hit. SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR00922. NusG. 1 hit.
PROSITE	PS01014. NUSG. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0CAC8_ACAM1

Accession

Primary (citable) accession number: B0CAC8

Entry history

Integrated into UniProtKB/TrEMBL:	February 26, 2008
Last sequence update:	February 26, 2008
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)