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Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase with EAL and GAF domains

Gene

AM1_5088

Organism
Acaryochloris marina (strain MBIC 11017)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesterase with EAL and GAF domainsImported
Gene namesi
Ordered Locus Names:AM1_5088Imported
OrganismiAcaryochloris marina (strain MBIC 11017)Imported
Taxonomic identifieri329726 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesAcaryochloridaceaeAcaryochloris
Proteomesi
  • UP000000268 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi329726.AM1_5088.

Structurei

3D structure databases

ProteinModelPortaliB0C776.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 82PAS (PER-ARNT-SIM)InterPro annotationAdd BLAST48
Domaini351 – 484GGDEFInterPro annotationAdd BLAST134
Domaini493 – 748EALInterPro annotationAdd BLAST256

Phylogenomic databases

eggNOGiCOG5001. LUCA.
OrthoDBiPOG091H049G.

Family and domain databases

CDDicd01948. EAL. 1 hit.
cd01949. GGDEF. 1 hit.
cd00130. PAS. 1 hit.
Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProiView protein in InterPro
IPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom-like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR000014. PAS.
IPR013655. PAS_fold_3.
PfamiView protein in Pfam
PF00563. EAL. 1 hit.
PF01590. GAF. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
SMARTiView protein in SMART
SM00052. EAL. 1 hit.
SM00065. GAF. 1 hit.
SM00267. GGDEF. 1 hit.
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiView protein in PROSITE
PS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50112. PAS. 1 hit.

Sequencei

Sequence statusi: Complete.

B0C776-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTFPPLSEIV KSDQQSKLDH LSAACPAVMY SSCPGAYELT AVSKSVTSLF
60 70 80 90 100
GYTDQDLLAE PTRWLSLIHP DDRSLALETL SQGTLDVWQE CEYRFFHKQL
110 120 130 140 150
GYRWVQNIFQ LVSKPNGPGL ELIGCWLDRT EHLQHRLAQQ QRDNLLTAVA
160 170 180 190 200
EASQYLLTGS HFNTAVTKAL AVVGNAAQID RLYVCELHTS TAGVLTPQLR
210 220 230 240 250
YAWVKKTESA SSLHLPWTVP SDVIGQRRWY QSLVRRLPFS QLTRDFHEIE
260 270 280 290 300
RSHLKRADIC SVFLLPIIIE DQLWGFMSFE NRHIERQWST PDISLLQTLV
310 320 330 340 350
ASLSGALKHH QKETELLHHA FHDPLTDLPN RALFINRLEQ SLKQLQRYPD
360 370 380 390 400
YLFAVLFLDL DRFKIINDSM GHGVGDQLLM GIAERLLSSL RPGDTASRLG
410 420 430 440 450
GDEFVILLNG LQNQEDATST AERLRQQLTL PFNLGVHEIF IDVSIGITLS
460 470 480 490 500
NFGYHDAEQV LQDADVAMYQ AKSAGKGCHK VFNTGMQSQT MARSQLETEM
510 520 530 540 550
RRAIERQAFE IYYQPIVCLK TGAIDAFEAL IRWYDSNHQP IAASDLIGIA
560 570 580 590 600
EESGMIQDLG LSVLQQACNQ LRQWQRLPDY ETLRISVNLS AKQLFHSDLV
610 620 630 640 650
TKVADIIAAS RIDPTHLKLE LTESTIIRND QTTISLLKQL RELGLELYLD
660 670 680 690 700
DFGAGYSSLS YLYSLPINAL KIDQTFVQRI DMGAEGQAII RSILLLANNL
710 720 730 740 750
DLQVVAEGVE NKIQLNYLNS LNCTHGQGFL FAPPLTARGA TSLLRSQDRF

EYQSA
Length:755
Mass (Da):85,212
Last modified:February 26, 2008 - v1
Checksum:iBC7C2B02968659BE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000828 Genomic DNA. Translation: ABW30053.1.
RefSeqiWP_012165323.1. NC_009925.1.

Genome annotation databases

EnsemblBacteriaiABW30053; ABW30053; AM1_5088.
KEGGiamr:AM1_5088.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiB0C776_ACAM1
AccessioniPrimary (citable) accession number: B0C776
Entry historyiIntegrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: June 7, 2017
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported