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Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase with PAS domain

Gene

AM1_1262

Organism
Acaryochloris marina (strain MBIC 11017)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesterase with PAS domainImported
Gene namesi
Ordered Locus Names:AM1_1262Imported
OrganismiAcaryochloris marina (strain MBIC 11017)Imported
Taxonomic identifieri329726 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesAcaryochloridaceaeAcaryochloris
Proteomesi
  • UP000000268 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi329726.AM1_1262.

Structurei

3D structure databases

ProteinModelPortaliB0C439.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 107PAS (PER-ARNT-SIM)InterPro annotationAdd BLAST75
Domaini98 – 155PAC (PAS-associated C-terminal)InterPro annotationAdd BLAST58
Domaini156 – 228PAS (PER-ARNT-SIM)InterPro annotationAdd BLAST73
Domaini232 – 285PAC (PAS-associated C-terminal)InterPro annotationAdd BLAST54
Domaini481 – 614GGDEFInterPro annotationAdd BLAST134
Domaini623 – 876EALInterPro annotationAdd BLAST254

Phylogenomic databases

eggNOGiENOG4105BZU. Bacteria.
ENOG410XNMH. LUCA.
HOGENOMiHOG000035500.
OMAiVSAHERI.
OrthoDBiPOG091H049G.

Family and domain databases

CDDicd01948. EAL. 1 hit.
cd01949. GGDEF. 1 hit.
Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProiIPR001633. EAL_dom.
IPR029016. GAF_dom-like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013656. PAS_4.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
PF08448. PAS_4. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 2 hits.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 2 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 2 hits.
PS50112. PAS. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0C439-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQCEIQSSLA VDFTETFSQE KIPKDLEKGI GFYKTIIRNL PDLVWLKNID
60 70 80 90 100
GVYLACNNRF EDFVGFPEQE IVGKTDHDLV DARLADLSRR HDTEVILQGY
110 120 130 140 150
PSVLEKWTTF ASDGHSELLE ISRVPIQDAQ GELIGLLGIG HNITTRRESE
160 170 180 190 200
EKLQQSEERF LLAMRGANDG LWDWNLETDE VYYSPRWKSM LGYENDELAH
210 220 230 240 250
DLSTWENLVH PDDKKKALAL VEDYLDGKSD AFDVEMRMQH KAGHEIYVLS
260 270 280 290 300
RAFLVHRATD GKAVRLVGTH VDITARKKAE AFDDKNAEIL EMIATGKPAT
310 320 330 340 350
KIYDEIALMY ESRHPGMRCS MLELQDGRLM HGGAPSLPKE YCDAVHGLQN
360 370 380 390 400
GPNVGSCGTS TYTGKRVLVE NIETDPKWAK IKHVALPHGM RCCWSEPIKN
410 420 430 440 450
SSGIVLGAFG MYYNHPALPN ELESNDLKSA ARLAGIVMER DQAQKKIREL
460 470 480 490 500
AFNDSLTGLA SRAHFYQNLE VAIKRSDRNA SRLGLLYIDL DNFKGVNDSL
510 520 530 540 550
GHDAGDLLLR EIGHRLQRVA RDIDFVARLS GDEFCILVTD VDDDYAASTV
560 570 580 590 600
AQRCLEEVSQ SIELSARKFT PACSIGIAHY PDDGRELSTL IKAADTSLYA
610 620 630 640 650
AKERGKNRYA FYQPQLTEQA EYRFRVEQNL REAVEKQQLS LVYQPQVELF
660 670 680 690 700
SGNIIGVEAL CRWHHPQLGE VLPTEFIATA ERIGMMKPLT EWVLKAACNQ
710 720 730 740 750
AVAWKRAGLP PIRMAVNISP AQFLDKYFVS LIQYVLEETG MVPTELKLEV
760 770 780 790 800
TESVVQTDQQ NLSIFRELKD LGVLLAIDDF GKGYSSFASL KHLTVDCLKI
810 820 830 840 850
DKYFIDDMLV DRKSQTLIAA MIDMGHNLDH EIIAEGVETV EQYQMLQQFG
860 870 880 890
CETAQGYLLS KPVSPDSISK ILKLNRLTHL AHLDANPLHL G
Length:891
Mass (Da):100,338
Last modified:February 26, 2008 - v1
Checksum:i92D1DA810D671281
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000828 Genomic DNA. Translation: ABW26299.1.
RefSeqiWP_012161837.1. NC_009925.1.

Genome annotation databases

EnsemblBacteriaiABW26299; ABW26299; AM1_1262.
KEGGiamr:AM1_1262.
PATRICi20616954. VBIAcaMar40141_1124.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000828 Genomic DNA. Translation: ABW26299.1.
RefSeqiWP_012161837.1. NC_009925.1.

3D structure databases

ProteinModelPortaliB0C439.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi329726.AM1_1262.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABW26299; ABW26299; AM1_1262.
KEGGiamr:AM1_1262.
PATRICi20616954. VBIAcaMar40141_1124.

Phylogenomic databases

eggNOGiENOG4105BZU. Bacteria.
ENOG410XNMH. LUCA.
HOGENOMiHOG000035500.
OMAiVSAHERI.
OrthoDBiPOG091H049G.

Family and domain databases

CDDicd01948. EAL. 1 hit.
cd01949. GGDEF. 1 hit.
Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProiIPR001633. EAL_dom.
IPR029016. GAF_dom-like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013656. PAS_4.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
PF08448. PAS_4. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 2 hits.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 2 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 2 hits.
PS50112. PAS. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB0C439_ACAM1
AccessioniPrimary (citable) accession number: B0C439
Entry historyi
Integrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: November 2, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.