Unreviewed, UniProtKB/TrEMBL B0C414 (B0C414_ACAM1)

Names and origin

Protein names

Submitted name:
    TPR domain protein EMBL ABW26274.1

Gene names

Ordered Locus Names:

AM1_1237

Organism

Acaryochloris marina (strain MBIC 11017) [Complete proteome] [HAMAP]

Taxonomic identifier

329726 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Acaryochloris

Protein attributes

Sequence length	1865 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

Ontologies

Keywords
Domain	Repeat RuleBase RU003537V0 TPR repeat RuleBase RU003339V0
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0C414-1 [UniParc]. Last modified February 26, 2008. Version 1. Checksum: 89D763FD7A402472	FASTA	1,865	209,905
	10 20 30 40 50 60 MTKRTASSSG HDITADRQFI PWLAQQKISI ACTTYQTSRL MLLGVSPDGR TISGFERIFD 70 80 90 100 110 120 RAMGLYTTTD RLYLSSKYQI WRFDNVLSGQ QQHNGYDKLY IPRIGYTTGD LDIHDIVEVE 130 140 150 160 170 180 RGIDGTPWQE TLPVPFVFVS TLLNCIATVS DHYSCQPLWK PPFISRIINE DRCHLNGLAA 190 200 210 220 230 240 VNGQPRYVTA VSRSDIIDGW RDRRQDGGLV MDLSTNEIVA TGFSMPHSPR WYRDRLWLLN 250 260 270 280 290 300 SGRGELGYVD LRTGTFEPIA FCPGYLRGLA FWGDFAIVGL SQPRNGDKTF SGLPLDDILK 310 320 330 340 350 360 AKDASPRCGL MVINLNTGAI EHWLRFEGII TELYDVQILP QVQRPMALGF QSEEIAQLIT 370 380 390 400 410 420 LGPQVPDPPQ PNPTVSPAPP KPPTTLTQPE DQPELADLRQ HRQHLVQQWL NLPLEQLEAA 430 440 450 460 470 480 YGGELGQAHR TLVNHDLRYE PLTAAEQAFI EPLMTALTTH PVQSLLALMP YRAAYQLPER 490 500 510 520 530 540 WFEPITIPSW LVNDYLAYMQ AVPLFFQAVG ESEQYAQYLN HWFTFIHRKI HQNLNSASWQ 550 560 570 580 590 600 SVAAVAAEAV FAPIYFNDLN LKDTFIKWAA ITEFSLEHRG MTVHQHGSPR PSHRSKIRLG 610 620 630 640 650 660 VLNQAYSPHS ETFSTLPFYE HLDRQQFEII LYAESSQDHP LEAYCRSRCD QFVLLPQDLP 670 680 690 700 710 720 ESVQRIRNDD LDILLFGINI AVGNKSTARL AMYRLARVQV SANSSPVTSG INNIDYYLSG 730 740 750 760 770 780 ELTTPAETFQ SQYSEKLVTW AGPSCCYRFP PSAQQPTAAS YYRRDLNIAD DAVVFVSGAN 790 800 810 820 830 840 FFKLIPELRI TWTQILAAVP NSVLLLYPFS AWSHHYPVSA FRNHMAALFA GDGIDPSRLI 850 860 870 880 890 900 IQDPIPNREQ VKQLLQIADV YLDAYPFTGV TSLLDPLEVG LPVVTQAGHS LRSRQGPALL 910 920 930 940 950 960 ESIDLTDLIA TDEQGYVELA IQLGQDSTRR QQYRTLIQQK MAANPAFMDS PAYGAQVGTL 970 980 990 1000 1010 1020 LQQLLPSSFA ELEEEHPPSA SRRRQRVIAF SLWGANPKYT TGALKNADLA PTLYPGWICR 1030 1040 1050 1060 1070 1080 FYVDQTVPSE VVNQLKARSH VEVIQLDGDR GWKMSFARFL PAADPDVEVL ICRDADSRLN 1090 1100 1110 1120 1130 1140 LREKAAVEAW LQSPQKYHIM RDHPRHNVPM LAGMWGVKGN VLDMELLVEQ HLVDQADLGL 1150 1160 1170 1180 1190 1200 RYGIDQHFLA TQIYPKTQSS CMVHDEIFLQ NPYPAARQGL EYVGQVFLED ESTLKPIDDL 1210 1220 1230 1240 1250 1260 LQQHLLKNDP LALNGFEPSS PSATPATTLA APSTVQALFE RSRQLKKENK LTEAEACLRE 1270 1280 1290 1300 1310 1320 VIHLYPNHWG AYNNLGTLLQ NQGNIQEAEA CYQQALQLNT NFAEAHSNLA SIWQLNEQPE 1330 1340 1350 1360 1370 1380 RAKAGFYRAL QLKPDYVPAH LNLANLYKEQ RRMAVAIEHY QKVVVAEPQH TEAHFSLGQI 1390 1400 1410 1420 1430 1440 FEYQGKSEEA LACYERALQG NPETHSLWFF ISLVKIKLCN WQDYEAQVQR LQQMIAESFT 1450 1460 1470 1480 1490 1500 AKYTPNPFVL STFNFPLELH QAAARNQAQN AQRAVAQLRS SLTFAHPCKA TPKLRIGYLS 1510 1520 1530 1540 1550 1560 PDLRDHAVGR LVVDLFPHHN RDQYEIVAYT TVDVEDHITQ QIQTGCDAFV DLSPLSTEQT 1570 1580 1590 1600 1610 1620 AQRIYDDGIQ ILVDLAGYTI GNAASVLSLQ PAPIQAQWLG YPDTMGAEFI QYALADQWLI 1630 1640 1650 1660 1670 1680 SPEIAQSYTE KIVYLPHAFV GSPLAISDRP MTRAEFGVPE SGFVFCCFNS HYKITPDLFD 1690 1700 1710 1720 1730 1740 VWMRILQQVP DSVLWLIEGA ETVMGNLRTE AKQRGVNPDR LVFAPKIAHE DYLARYGLAD 1750 1760 1770 1780 1790 1800 LYLDTFVYNA GSTAVATCWS GLPMLTCPGP TNASRMGASI CAAAGLESLI CKSVADYEQR 1810 1820 1830 1840 1850 1860 AIHLATHPAE LAEIRNGLKR QLQSPETYPA LFQVEQFVAS LESAFQQMWQ GYLNDAPLQD VVVSR

References

[1]

"Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina." Swingley W.D., Chen M., Cheung P.C., Conrad A.L., Dejesa L.C., Hao J., Honchak B.M., Karbach L.E., Kurdoglu A., Lahiri S., Mastrian S.D., Miyashita H., Page L., Ramakrishna P., Satoh S., Sattley W.M., Shimada Y., Taylor H.L. , Tomo T., Tsuchiya T., Wang Z.T., Raymond J., Mimuro M., Blankenship R.E., Touchman J.W. Proc. Natl. Acad. Sci. U.S.A. 105:2005-2010(2008) [PubMed: 18252824] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000828 Genomic DNA. Translation: ABW26274.1.
RefSeq	YP_001515588.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	5680060.
GenomeReviews	Gene locus AM1_1237 in contig CP000828_GR.
KEGG	amr:AM1_1237.
Organism-specific databases
CMR	Search...
Family and domain databases
InterPro	IPR017481. CHP03032. IPR001440. TPR-1. IPR011990. TPR-like_helical. IPR013026. TPR_region. IPR019734. TPR_repeat. [Graphical view]
Gene3D	G3DSA:1.25.40.10. TPR-like_helical. 1 hit.
Pfam	PF00515. TPR_1. 5 hits. [Graphical view]
SMART	SM00028. TPR. 5 hits. [Graphical view]
TIGRFAMs	TIGR03032. CHP03032. 1 hit.
PROSITE	PS50005. TPR. 5 hits. PS50293. TPR_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B0C414_ACAM1

Accession

Primary (citable) accession number: B0C414

Entry history

Integrated into UniProtKB/TrEMBL:	February 26, 2008
Last sequence update:	February 26, 2008
Last modified:	May 5, 2009
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)