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Protein

Chaperone protein ClpB

Gene

clpB

Organism
Acaryochloris marina (strain MBIC 11017)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionChaperoneUniRule annotationSAAS annotation
Biological processStress responseUniRule annotation
LigandATP-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Chaperone protein ClpBUniRule annotation
Gene namesi
Name:clpBUniRule annotationImported
Ordered Locus Names:AM1_2125Imported
OrganismiAcaryochloris marina (strain MBIC 11017)Imported
Taxonomic identifieri329726 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesAcaryochloridaceaeAcaryochloris
Proteomesi
  • UP000000268 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiB0BZT0

Interactioni

Subunit structurei

Homohexamer. The oligomerization is ATP-dependent.SAAS annotation
Homohexamer; The oligomerization is ATP-dependent.UniRule annotation

Protein-protein interaction databases

STRINGi329726.AM1_2125

Structurei

3D structure databases

ProteinModelPortaliB0BZT0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini200 – 344AAAInterPro annotationAdd BLAST145
Domaini603 – 770AAAInterPro annotationAdd BLAST168
Domaini773 – 862ClpB_D2-smallInterPro annotationAdd BLAST90

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili414 – 463UniRule annotationAdd BLAST50
Coiled coili501 – 535UniRule annotationAdd BLAST35

Sequence similaritiesi

Belongs to the ClpA/ClpB family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilUniRule annotation, RepeatSAAS annotation

Phylogenomic databases

eggNOGiENOG4105C2Z Bacteria
COG0542 LUCA
HOGENOMiHOG000218211
KOiK03695
OMAiHHKVRIK
OrthoDBiPOG091H019M

Family and domain databases

Gene3Di1.10.1780.10, 1 hit
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR003959 ATPase_AAA_core
IPR017730 Chaperonin_ClpB
IPR019489 Clp_ATPase_C
IPR004176 Clp_N
IPR036628 Clp_N_dom_sf
IPR001270 ClpA/B
IPR018368 ClpA/B_CS1
IPR028299 ClpA/B_CS2
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00004 AAA, 1 hit
PF07724 AAA_2, 1 hit
PF02861 Clp_N, 2 hits
PF10431 ClpB_D2-small, 1 hit
PRINTSiPR00300 CLPPROTEASEA
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SM01086 ClpB_D2-small, 1 hit
SUPFAMiSSF52540 SSF52540, 2 hits
SSF81923 SSF81923, 1 hit
TIGRFAMsiTIGR03346 chaperone_ClpB, 1 hit
PROSITEiView protein in PROSITE
PS00870 CLPAB_1, 1 hit
PS00871 CLPAB_2, 1 hit

Sequencei

Sequence statusi: Complete.

B0BZT0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQPTNHDQFT EKAWAAIVRT SDLAKEAQQQ QIESEHLLQA LVEDDGLAGQ
60 70 80 90 100
IFTKAGTDVQ RVRDRTTEFI NRQAKLTTPS ESVYLGRSLD TLFDRAENFR
110 120 130 140 150
RSLGDDFISI EHLVLGYIED DRFGQPLLQG LGITEQMLKQ AVTDIRGNHK
160 170 180 190 200
VTDKNPEGKY ESLEKYGRDL TALAREGKLD PVIGRDDEIR RTIQILSRRT
210 220 230 240 250
KNNPVLIGEP GVGKTAIAEG LAQRIVARDV PESLRDRKLI ALDMGSLIAG
260 270 280 290 300
AKYRGEFEER LKSVLKEVTE SDGLMILFID EIHTVVGAGA SQGAMDAGNL
310 320 330 340 350
LKPMLARGEL RCIGATTLDE YRKYIEKDAA LERRFQQVYI DQPNIQDTVS
360 370 380 390 400
ILRGLKERYE VHHGVKISDN ALVAAATLST RYISDRFLPD KAIDLMDEAA
410 420 430 440 450
AKLKMEITSK PEELDEIDRK ILQLEMERLS LEKESDRASL ERLERIEQEI
460 470 480 490 500
ANLQEDQKTL NAQWQSEKQI IDDIQTIKEE IDRVNIEIQQ AERNYDLNHA
510 520 530 540 550
AELKYGKLTN LQRQLESAET QLAQRQTNTN SLLREEVTDA DIAEIISKWT
560 570 580 590 600
GIPVSKLVAS EMEKLLHLED ELHQRVIGQE EAVTAVSDAI QRSRAGLADP
610 620 630 640 650
NRPIASFIFL GPTGVGKTEL GKALAAYLFD TEDAMVRIDM SEYMEKHTVA
660 670 680 690 700
RMIGAPPGYV GYDEGGQLTE AVRRRPYAVI LFDEIEKAHP DVFNIMLQIL
710 720 730 740 750
DDGRVTDSQG RTVDFKNAVI IMTSNIGSQH ILDLAGDDSR YSEMQNRVMD
760 770 780 790 800
AMRSHFRPEF LNRIDELIIF RSLRKDQLRR ITQLQVQRLA KRLSDRKMSL
810 820 830 840 850
KLSESALDFL AEVGYDPVYG ARPLKRAIQR ELETQIAKAI LRGDFGEGDT
860 870
IFADVENERL IFKRMGAEVL TTSGS
Length:875
Mass (Da):98,888
Last modified:February 26, 2008 - v1
Checksum:iF862942B0372F9AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000828 Genomic DNA Translation: ABW27140.1
RefSeqiWP_012162622.1, NC_009925.1

Genome annotation databases

EnsemblBacteriaiABW27140; ABW27140; AM1_2125
KEGGiamr:AM1_2125

Similar proteinsi

Entry informationi

Entry nameiB0BZT0_ACAM1
AccessioniPrimary (citable) accession number: B0BZT0
Entry historyiIntegrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: March 28, 2018
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health