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Protein

Chaperone protein ClpB

Gene

clpB

Organism
Acaryochloris marina (strain MBIC 11017)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionChaperoneUniRule annotationSAAS annotation
Biological processStress responseUniRule annotation
LigandATP-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Chaperone protein ClpBUniRule annotation
Gene namesi
Name:clpBUniRule annotationImported
Ordered Locus Names:AM1_2125Imported
OrganismiAcaryochloris marina (strain MBIC 11017)Imported
Taxonomic identifieri329726 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesAcaryochloridaceaeAcaryochloris
Proteomesi
  • UP000000268 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiB0BZT0.

Interactioni

Subunit structurei

Homohexamer. The oligomerization is ATP-dependent.SAAS annotation
Homohexamer; The oligomerization is ATP-dependent.UniRule annotation

Protein-protein interaction databases

STRINGi329726.AM1_2125.

Structurei

3D structure databases

ProteinModelPortaliB0BZT0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini200 – 344AAAInterPro annotationAdd BLAST145
Domaini603 – 770AAAInterPro annotationAdd BLAST168
Domaini773 – 862ClpB_D2-smallInterPro annotationAdd BLAST90

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili414 – 463UniRule annotationAdd BLAST50
Coiled coili501 – 535UniRule annotationAdd BLAST35

Sequence similaritiesi

Belongs to the ClpA/ClpB family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilUniRule annotation, RepeatSAAS annotation

Phylogenomic databases

eggNOGiENOG4105C2Z. Bacteria.
COG0542. LUCA.
HOGENOMiHOG000218211.
KOiK03695.
OMAiHHKVRIK.
OrthoDBiPOG091H019M.

Family and domain databases

Gene3Di1.10.1780.10. 1 hit.
InterProiView protein in InterPro
IPR003593. AAA+_ATPase.
IPR003959. ATPase_AAA_core.
IPR017730. Chaperonin_ClpB.
IPR019489. Clp_ATPase_C.
IPR004176. Clp_N.
IPR001270. ClpA/B.
IPR018368. ClpA/B_CS1.
IPR028299. ClpA/B_CS2.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00004. AAA. 1 hit.
PF07724. AAA_2. 1 hit.
PF02861. Clp_N. 2 hits.
PF10431. ClpB_D2-small. 1 hit.
PRINTSiPR00300. CLPPROTEASEA.
SMARTiView protein in SMART
SM00382. AAA. 2 hits.
SM01086. ClpB_D2-small. 1 hit.
SUPFAMiSSF52540. SSF52540. 2 hits.
SSF81923. SSF81923. 1 hit.
TIGRFAMsiTIGR03346. chaperone_ClpB. 1 hit.
PROSITEiView protein in PROSITE
PS00870. CLPAB_1. 1 hit.
PS00871. CLPAB_2. 1 hit.

Sequencei

Sequence statusi: Complete.

B0BZT0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQPTNHDQFT EKAWAAIVRT SDLAKEAQQQ QIESEHLLQA LVEDDGLAGQ
60 70 80 90 100
IFTKAGTDVQ RVRDRTTEFI NRQAKLTTPS ESVYLGRSLD TLFDRAENFR
110 120 130 140 150
RSLGDDFISI EHLVLGYIED DRFGQPLLQG LGITEQMLKQ AVTDIRGNHK
160 170 180 190 200
VTDKNPEGKY ESLEKYGRDL TALAREGKLD PVIGRDDEIR RTIQILSRRT
210 220 230 240 250
KNNPVLIGEP GVGKTAIAEG LAQRIVARDV PESLRDRKLI ALDMGSLIAG
260 270 280 290 300
AKYRGEFEER LKSVLKEVTE SDGLMILFID EIHTVVGAGA SQGAMDAGNL
310 320 330 340 350
LKPMLARGEL RCIGATTLDE YRKYIEKDAA LERRFQQVYI DQPNIQDTVS
360 370 380 390 400
ILRGLKERYE VHHGVKISDN ALVAAATLST RYISDRFLPD KAIDLMDEAA
410 420 430 440 450
AKLKMEITSK PEELDEIDRK ILQLEMERLS LEKESDRASL ERLERIEQEI
460 470 480 490 500
ANLQEDQKTL NAQWQSEKQI IDDIQTIKEE IDRVNIEIQQ AERNYDLNHA
510 520 530 540 550
AELKYGKLTN LQRQLESAET QLAQRQTNTN SLLREEVTDA DIAEIISKWT
560 570 580 590 600
GIPVSKLVAS EMEKLLHLED ELHQRVIGQE EAVTAVSDAI QRSRAGLADP
610 620 630 640 650
NRPIASFIFL GPTGVGKTEL GKALAAYLFD TEDAMVRIDM SEYMEKHTVA
660 670 680 690 700
RMIGAPPGYV GYDEGGQLTE AVRRRPYAVI LFDEIEKAHP DVFNIMLQIL
710 720 730 740 750
DDGRVTDSQG RTVDFKNAVI IMTSNIGSQH ILDLAGDDSR YSEMQNRVMD
760 770 780 790 800
AMRSHFRPEF LNRIDELIIF RSLRKDQLRR ITQLQVQRLA KRLSDRKMSL
810 820 830 840 850
KLSESALDFL AEVGYDPVYG ARPLKRAIQR ELETQIAKAI LRGDFGEGDT
860 870
IFADVENERL IFKRMGAEVL TTSGS
Length:875
Mass (Da):98,888
Last modified:February 26, 2008 - v1
Checksum:iF862942B0372F9AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000828 Genomic DNA. Translation: ABW27140.1.
RefSeqiWP_012162622.1. NC_009925.1.

Genome annotation databases

EnsemblBacteriaiABW27140; ABW27140; AM1_2125.
KEGGiamr:AM1_2125.

Similar proteinsi

Entry informationi

Entry nameiB0BZT0_ACAM1
AccessioniPrimary (citable) accession number: B0BZT0
Entry historyiIntegrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: July 5, 2017
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported