B0BUN4 (B0BUN4_RICRO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
30S ribosomal protein S20 HAMAP MF_00500

Gene names

Name:	rpsT HAMAP MF_00500
Ordered Locus Names:	RrIowa_1171

Organism

Rickettsia rickettsii (strain Iowa) [Complete proteome] [HAMAP]

Taxonomic identifier

452659 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group

Protein attributes

Sequence length	93 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 16S ribosomal RNA By similarity. HAMAP MF_00500
Sequence similarities	Belongs to the ribosomal protein S20P family. HAMAP MF_00500

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP MF_00500
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_00500 EMBL ABY72944.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0BUN4 [UniParc]. Last modified February 26, 2008. Version 1. Checksum: 3ECEC265BE7C9B22	FASTA	93	10,354
	10 20 30 40 50 60 MMANHSSAKK AARQTVKRTL INKKRSSAIK TFIKKVVHEI SLGNKENANI ALSVAQSKIM 70 80 90 QGVKKNIIKL NTASRKISRL SRQIKSLKVN NTL

References

[1]

"Genomic comparison of virulent Rickettsia rickettsii Sheila Smith and avirulent Rickettsia rickettsii Iowa." Ellison D.W., Clark T.R., Sturdevant D.E., Virtaneva K., Porcella S.F., Hackstadt T. Infect. Immun. 76:542-550(2008) [PubMed: 18025092] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Iowa.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000766 Genomic DNA. Translation: ABY72944.1.
RefSeq	YP_001650350.1. NC_010263.2.
3D structure databases
ProteinModelPortal	B0BUN4.
ModBase	Search...
Protein-protein interaction databases
STRING	B0BUN4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5849171.
GenomeReviews	Gene locus RrIowa_1171 in contig CP000766_GR.
KEGG	rrj:RrIowa_1171.
PATRIC	17908255. VBIRicRic59104_1159.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG734145.
OMA	RTQMRGA.
ProtClustDB	PRK00239.
Enzyme and pathway databases
BioCyc	RRIC452659:RRIOWA_1171-MONOMER.
Family and domain databases
HAMAP	MF_00500. Ribosomal_S20. [Tree]
InterPro	IPR002583. Ribosomal_S20. [Graphical view]
Gene3D	G3DSA:1.20.58.110. Ribosomal_S20. 1 hit.
KO	K02968.
Pfam	PF01649. Ribosomal_S20p. 1 hit. [Graphical view]
ProDom	PD004231. Ribosomal_S20. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF46992. Ribosomal_S20p. 1 hit.
TIGRFAMs	TIGR00029. S20. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B0BUN4_RICRO

Accession

Primary (citable) accession number: B0BUN4

Entry history

Integrated into UniProtKB/TrEMBL:	February 26, 2008
Last sequence update:	February 26, 2008
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)