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B0BNG6

- B0BNG6_RAT

UniProt

B0BNG6 - B0BNG6_RAT

Protein
Submitted name:

Use1 protein

Gene

Use1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (26 Feb 2008)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. endoplasmic reticulum tubular network organization Source: Ensembl
    2. regulation of ER to Golgi vesicle-mediated transport Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Use1 proteinImported
    Gene namesi
    Name:Use1Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

    Organism-specific databases

    RGDi1306660. Use1.

    Subcellular locationi

    GO - Cellular componenti

    1. endoplasmic reticulum Source: Ensembl

    PTM / Processingi

    Proteomic databases

    PaxDbiB0BNG6.
    PRIDEiB0BNG6.

    Expressioni

    Gene expression databases

    ArrayExpressiB0BNG6.
    GenevestigatoriB0BNG6.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000022650.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG299387.
    HOGENOMiHOG000007677.
    HOVERGENiHBG079328.
    KOiK08507.
    PhylomeDBiB0BNG6.

    Family and domain databases

    InterProiIPR019150. Vesicle_transport_protein_Use1.
    [Graphical view]
    PfamiPF09753. Use1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    B0BNG6-1 [UniParc]FASTAAdd to Basket

    « Hide

    ACHRPLATSR LELNLVRLLC RCESMAAEKR EPDEWRLEKY VGALEDMLQA    50
    LKVQASKPAS EVISEYSRKV DFLKGMLQAE KLTSSSEKAL ANQFLAPGRV 100
    PTTAKERVPA TKTVHLQSRA RYTSEMRSEL LGTESSGELE ADMRKRVVKG 150
    PRPADEKQSA SELDLVLQRH QGLQEKLAEE MLGLARSLKT NTLAAQSVIK 200
    KDNQTLSHSL KMADQNLEKL KLESERLEQH AQKSVNWLLW AMLIVVCFVF 250
    ISMILFIRIM PRLK 264
    Length:264
    Mass (Da):29,926
    Last modified:February 26, 2008 - v1
    Checksum:iDE5E87A055ECF3EE
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC158812 mRNA. Translation: AAI58813.1.
    RefSeqiNP_001162571.1. NM_001169100.1.
    UniGeneiRn.2957.

    Genome annotation databases

    GeneIDi290627.
    KEGGirno:290627.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC158812 mRNA. Translation: AAI58813.1 .
    RefSeqi NP_001162571.1. NM_001169100.1.
    UniGenei Rn.2957.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000022650.

    Proteomic databases

    PaxDbi B0BNG6.
    PRIDEi B0BNG6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 290627.
    KEGGi rno:290627.

    Organism-specific databases

    CTDi 55850.
    RGDi 1306660. Use1.

    Phylogenomic databases

    eggNOGi NOG299387.
    HOGENOMi HOG000007677.
    HOVERGENi HBG079328.
    KOi K08507.
    PhylomeDBi B0BNG6.

    Miscellaneous databases

    NextBioi 631314.

    Gene expression databases

    ArrayExpressi B0BNG6.
    Genevestigatori B0BNG6.

    Family and domain databases

    InterProi IPR019150. Vesicle_transport_protein_Use1.
    [Graphical view ]
    Pfami PF09753. Use1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: LiverImported.

    Entry informationi

    Entry nameiB0BNG6_RAT
    AccessioniPrimary (citable) accession number: B0BNG6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 26, 2008
    Last sequence update: February 26, 2008
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)