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B0BNG6

- B0BNG6_RAT

UniProt

B0BNG6 - B0BNG6_RAT

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Protein
Submitted name:

Use1 protein

Gene

Use1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  1. endoplasmic reticulum tubular network organization Source: Ensembl
  2. regulation of ER to Golgi vesicle-mediated transport Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Use1 proteinImported
Gene namesi
Name:Use1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1306660. Use1.

Subcellular locationi

GO - Cellular componenti

  1. endoplasmic reticulum Source: Ensembl
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiB0BNG6.
PRIDEiB0BNG6.

Expressioni

Gene expression databases

ExpressionAtlasiB0BNG6. baseline.
GenevestigatoriB0BNG6.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000022650.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG299387.
HOGENOMiHOG000007677.
HOVERGENiHBG079328.
KOiK08507.
PhylomeDBiB0BNG6.

Family and domain databases

InterProiIPR019150. Vesicle_transport_protein_Use1.
[Graphical view]
PfamiPF09753. Use1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

B0BNG6-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
ACHRPLATSR LELNLVRLLC RCESMAAEKR EPDEWRLEKY VGALEDMLQA
60 70 80 90 100
LKVQASKPAS EVISEYSRKV DFLKGMLQAE KLTSSSEKAL ANQFLAPGRV
110 120 130 140 150
PTTAKERVPA TKTVHLQSRA RYTSEMRSEL LGTESSGELE ADMRKRVVKG
160 170 180 190 200
PRPADEKQSA SELDLVLQRH QGLQEKLAEE MLGLARSLKT NTLAAQSVIK
210 220 230 240 250
KDNQTLSHSL KMADQNLEKL KLESERLEQH AQKSVNWLLW AMLIVVCFVF
260
ISMILFIRIM PRLK
Length:264
Mass (Da):29,926
Last modified:February 26, 2008 - v1
Checksum:iDE5E87A055ECF3EE
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC158812 mRNA. Translation: AAI58813.1.
RefSeqiNP_001162571.1. NM_001169100.1.
UniGeneiRn.2957.

Genome annotation databases

GeneIDi290627.
KEGGirno:290627.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC158812 mRNA. Translation: AAI58813.1 .
RefSeqi NP_001162571.1. NM_001169100.1.
UniGenei Rn.2957.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000022650.

Proteomic databases

PaxDbi B0BNG6.
PRIDEi B0BNG6.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 290627.
KEGGi rno:290627.

Organism-specific databases

CTDi 55850.
RGDi 1306660. Use1.

Phylogenomic databases

eggNOGi NOG299387.
HOGENOMi HOG000007677.
HOVERGENi HBG079328.
KOi K08507.
PhylomeDBi B0BNG6.

Miscellaneous databases

NextBioi 631314.

Gene expression databases

ExpressionAtlasi B0BNG6. baseline.
Genevestigatori B0BNG6.

Family and domain databases

InterProi IPR019150. Vesicle_transport_protein_Use1.
[Graphical view ]
Pfami PF09753. Use1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: LiverImported.

Entry informationi

Entry nameiB0BNG6_RAT
AccessioniPrimary (citable) accession number: B0BNG6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: October 29, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)