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B0BNG6 (B0BNG6_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length264 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAI58813.1

Sequences

Sequence LengthMass (Da)Tools
B0BNG6 [UniParc].

Last modified February 26, 2008. Version 1.
Checksum: DE5E87A055ECF3EE

FASTA26429,926
        10         20         30         40         50         60 
ACHRPLATSR LELNLVRLLC RCESMAAEKR EPDEWRLEKY VGALEDMLQA LKVQASKPAS 

        70         80         90        100        110        120 
EVISEYSRKV DFLKGMLQAE KLTSSSEKAL ANQFLAPGRV PTTAKERVPA TKTVHLQSRA 

       130        140        150        160        170        180 
RYTSEMRSEL LGTESSGELE ADMRKRVVKG PRPADEKQSA SELDLVLQRH QGLQEKLAEE 

       190        200        210        220        230        240 
MLGLARSLKT NTLAAQSVIK KDNQTLSHSL KMADQNLEKL KLESERLEQH AQKSVNWLLW 

       250        260 
AMLIVVCFVF ISMILFIRIM PRLK 

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References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Liver EMBL AAI58813.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC158812 mRNA. Translation: AAI58813.1.
RefSeqNP_001162571.1. NM_001169100.1.
UniGeneRn.2957.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING10116.ENSRNOP00000022650.

Proteomic databases

PaxDbB0BNG6.
PRIDEB0BNG6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID290627.
KEGGrno:290627.

Organism-specific databases

CTD55850.
RGD1306660. Use1.

Phylogenomic databases

eggNOGNOG299387.
HOGENOMHOG000007677.
HOVERGENHBG079328.
KOK08507.
PhylomeDBB0BNG6.

Gene expression databases

ArrayExpressB0BNG6.
GenevestigatorB0BNG6.

Family and domain databases

InterProIPR019150. Vesicle_transport_protein_Use1.
[Graphical view]
PfamPF09753. Use1. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio631314.

Entry information

Entry nameB0BNG6_RAT
AccessionPrimary (citable) accession number: B0BNG6
Entry history
Integrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: April 16, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)