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Protein

SH3 domain-containing YSC84-like protein 1

Gene

Sh3yl1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
SH3 domain-containing YSC84-like protein 1
Gene namesi
Name:Sh3yl1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 6

Organism-specific databases

RGDi1306440. Sh3yl1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003415631 – 340SH3 domain-containing YSC84-like protein 1Add BLAST340

Proteomic databases

PaxDbiB0BNA1.

PTM databases

PhosphoSitePlusiB0BNA1.

Expressioni

Gene expression databases

BgeeiENSRNOG00000005522.
GenevisibleiB0BNA1. RN.

Interactioni

Subunit structurei

Interacts with SH3D19.By similarity

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000060428.

Structurei

3D structure databases

ProteinModelPortaliB0BNA1.
SMRiB0BNA1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini281 – 340SH3PROSITE-ProRule annotationAdd BLAST60

Sequence similaritiesi

Belongs to the SH3YL1 family.Curated

Keywords - Domaini

SH3 domain

Phylogenomic databases

eggNOGiKOG1843. Eukaryota.
COG2930. LUCA.
GeneTreeiENSGT00510000048137.
HOGENOMiHOG000215564.
HOVERGENiHBG108487.
InParanoidiB0BNA1.
KOiK20523.
OMAiISLEGSC.
OrthoDBiEOG091G0E6Y.
PhylomeDBiB0BNA1.
TreeFamiTF331022.

Family and domain databases

CDDicd11841. SH3_SH3YL1_like. 1 hit.
cd11525. SYLF_SH3YL1_like. 1 hit.
InterProiView protein in InterPro
IPR036028. SH3-like_dom_sf.
IPR001452. SH3_domain.
IPR035511. SH3YL1_SH3.
IPR033643. SYLF_SH3YL1-like.
IPR007461. Ysc84_actin-binding.
PfamiView protein in Pfam
PF00018. SH3_1. 1 hit.
PF04366. Ysc84. 1 hit.
PRINTSiPR00452. SH3DOMAIN.
SMARTiView protein in SMART
SM00326. SH3. 1 hit.
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiView protein in PROSITE
PS50002. SH3. 1 hit.

Sequencei

Sequence statusi: Complete.

B0BNA1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNPIPSNLK SEAKKAAKIL REFTEITSRN GPDKIIPAHV IAKAKGLAVL
60 70 80 90 100
SVIKAGFLVT ARGGSGIVLA RLPDGKWSAP SAIGIAGLGG GFEIGIEVSD
110 120 130 140 150
LVIILNYDRA VEAFAKGGNL TLGGNFTVAV GPLGRNLEGN VSLRSSAAVF
160 170 180 190 200
TYCKSRGLFA GISLEGSCLI ERKETNRKFY CQDIRAYDIL FGDVPQPAQA
210 220 230 240 250
EDLYEILNSF TEKYETEGQR INLKKVAREQ RKAKELPPKP SSRPQPSRPP
260 270 280 290 300
VQLNAGSQSN RNEYKLYPEL SSYHEKTGSL SQPIEVTALY SFEGQQPGDL
310 320 330 340
NFQAGDRIIV ISKTDSNFDW WEGKLRGQTG IFPANYVTMN
Length:340
Mass (Da):37,039
Last modified:February 26, 2008 - v1
Checksum:iE270CE133944F421
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC158742 mRNA. Translation: AAI58743.1.
RefSeqiNP_001102175.1. NM_001108705.2.
UniGeneiRn.1163.

Genome annotation databases

EnsembliENSRNOT00000068208; ENSRNOP00000060428; ENSRNOG00000005522.
GeneIDi362724.
KEGGirno:362724.
UCSCiRGD:1306440. rat.

Similar proteinsi

Entry informationi

Entry nameiSH3Y1_RAT
AccessioniPrimary (citable) accession number: B0BNA1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: February 26, 2008
Last modified: November 22, 2017
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families