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B0BNA1

- SH3Y1_RAT

UniProt

B0BNA1 - SH3Y1_RAT

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Protein
SH3 domain-containing YSC84-like protein 1
Gene
Sh3yl1
Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. phosphatidylinositol binding Source: Ensembl
Complete GO annotation...

GO - Biological processi

  1. phosphatidylinositol biosynthetic process Source: Ensembl
  2. regulation of ruffle assembly Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
SH3 domain-containing YSC84-like protein 1
Gene namesi
Name:Sh3yl1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 6

Organism-specific databases

RGDi1306440. Sh3yl1.

Subcellular locationi

GO - Cellular componenti

  1. ruffle membrane Source: Ensembl
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 340340SH3 domain-containing YSC84-like protein 1
PRO_0000341563Add
BLAST

Expressioni

Gene expression databases

GenevestigatoriB0BNA1.

Interactioni

Subunit structurei

Interacts with SH3D19 By similarity.

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000060428.

Structurei

3D structure databases

ProteinModelPortaliB0BNA1.
SMRiB0BNA1. Positions 271-340.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini281 – 34060SH3
Add
BLAST

Sequence similaritiesi

Belongs to the SH3YL1 family.
Contains 1 SH3 domain.

Keywords - Domaini

SH3 domain

Phylogenomic databases

eggNOGiCOG2930.
GeneTreeiENSGT00510000048137.
HOGENOMiHOG000215564.
HOVERGENiHBG108487.
OMAiANEKMYN.
OrthoDBiEOG7MPRFM.
PhylomeDBiB0BNA1.
TreeFamiTF331022.

Family and domain databases

InterProiIPR001452. SH3_domain.
IPR007461. Ysc84_actin-binding.
[Graphical view]
PfamiPF04366. DUF500. 1 hit.
PF00018. SH3_1. 1 hit.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0BNA1-1 [UniParc]FASTAAdd to Basket

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MNNPIPSNLK SEAKKAAKIL REFTEITSRN GPDKIIPAHV IAKAKGLAVL    50
SVIKAGFLVT ARGGSGIVLA RLPDGKWSAP SAIGIAGLGG GFEIGIEVSD 100
LVIILNYDRA VEAFAKGGNL TLGGNFTVAV GPLGRNLEGN VSLRSSAAVF 150
TYCKSRGLFA GISLEGSCLI ERKETNRKFY CQDIRAYDIL FGDVPQPAQA 200
EDLYEILNSF TEKYETEGQR INLKKVAREQ RKAKELPPKP SSRPQPSRPP 250
VQLNAGSQSN RNEYKLYPEL SSYHEKTGSL SQPIEVTALY SFEGQQPGDL 300
NFQAGDRIIV ISKTDSNFDW WEGKLRGQTG IFPANYVTMN 340
Length:340
Mass (Da):37,039
Last modified:February 26, 2008 - v1
Checksum:iE270CE133944F421
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC158742 mRNA. Translation: AAI58743.1.
RefSeqiNP_001102175.1. NM_001108705.2.
UniGeneiRn.1163.

Genome annotation databases

EnsembliENSRNOT00000068208; ENSRNOP00000060428; ENSRNOG00000005522.
GeneIDi362724.
KEGGirno:362724.
UCSCiRGD:1306440. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC158742 mRNA. Translation: AAI58743.1 .
RefSeqi NP_001102175.1. NM_001108705.2.
UniGenei Rn.1163.

3D structure databases

ProteinModelPortali B0BNA1.
SMRi B0BNA1. Positions 271-340.
ModBasei Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000060428.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000068208 ; ENSRNOP00000060428 ; ENSRNOG00000005522 .
GeneIDi 362724.
KEGGi rno:362724.
UCSCi RGD:1306440. rat.

Organism-specific databases

CTDi 26751.
RGDi 1306440. Sh3yl1.

Phylogenomic databases

eggNOGi COG2930.
GeneTreei ENSGT00510000048137.
HOGENOMi HOG000215564.
HOVERGENi HBG108487.
OMAi ANEKMYN.
OrthoDBi EOG7MPRFM.
PhylomeDBi B0BNA1.
TreeFami TF331022.

Miscellaneous databases

NextBioi 681005.

Gene expression databases

Genevestigatori B0BNA1.

Family and domain databases

InterProi IPR001452. SH3_domain.
IPR007461. Ysc84_actin-binding.
[Graphical view ]
Pfami PF04366. DUF500. 1 hit.
PF00018. SH3_1. 1 hit.
[Graphical view ]
PRINTSi PR00452. SH3DOMAIN.
SMARTi SM00326. SH3. 1 hit.
[Graphical view ]
SUPFAMi SSF50044. SSF50044. 1 hit.
PROSITEi PS50002. SH3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Spleen.

Entry informationi

Entry nameiSH3Y1_RAT
AccessioniPrimary (citable) accession number: B0BNA1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: February 26, 2008
Last modified: April 16, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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