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B0BNA1

- SH3Y1_RAT

UniProt

B0BNA1 - SH3Y1_RAT

Protein

SH3 domain-containing YSC84-like protein 1

Gene

Sh3yl1

Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 1 (26 Feb 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. phosphatidylinositol binding Source: Ensembl

    GO - Biological processi

    1. phosphatidylinositol biosynthetic process Source: Ensembl
    2. regulation of ruffle assembly Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    SH3 domain-containing YSC84-like protein 1
    Gene namesi
    Name:Sh3yl1
    OrganismiRattus norvegicus (Rat)
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 6

    Organism-specific databases

    RGDi1306440. Sh3yl1.

    Subcellular locationi

    GO - Cellular componenti

    1. ruffle membrane Source: Ensembl

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 340340SH3 domain-containing YSC84-like protein 1PRO_0000341563Add
    BLAST

    Expressioni

    Gene expression databases

    GenevestigatoriB0BNA1.

    Interactioni

    Subunit structurei

    Interacts with SH3D19.By similarity

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000060428.

    Structurei

    3D structure databases

    ProteinModelPortaliB0BNA1.
    SMRiB0BNA1. Positions 271-340.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini281 – 34060SH3PROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the SH3YL1 family.Curated
    Contains 1 SH3 domain.PROSITE-ProRule annotation

    Keywords - Domaini

    SH3 domain

    Phylogenomic databases

    eggNOGiCOG2930.
    GeneTreeiENSGT00510000048137.
    HOGENOMiHOG000215564.
    HOVERGENiHBG108487.
    OMAiANEKMYN.
    OrthoDBiEOG7MPRFM.
    PhylomeDBiB0BNA1.
    TreeFamiTF331022.

    Family and domain databases

    InterProiIPR001452. SH3_domain.
    IPR007461. Ysc84_actin-binding.
    [Graphical view]
    PfamiPF04366. DUF500. 1 hit.
    PF00018. SH3_1. 1 hit.
    [Graphical view]
    PRINTSiPR00452. SH3DOMAIN.
    SMARTiSM00326. SH3. 1 hit.
    [Graphical view]
    SUPFAMiSSF50044. SSF50044. 1 hit.
    PROSITEiPS50002. SH3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B0BNA1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNNPIPSNLK SEAKKAAKIL REFTEITSRN GPDKIIPAHV IAKAKGLAVL    50
    SVIKAGFLVT ARGGSGIVLA RLPDGKWSAP SAIGIAGLGG GFEIGIEVSD 100
    LVIILNYDRA VEAFAKGGNL TLGGNFTVAV GPLGRNLEGN VSLRSSAAVF 150
    TYCKSRGLFA GISLEGSCLI ERKETNRKFY CQDIRAYDIL FGDVPQPAQA 200
    EDLYEILNSF TEKYETEGQR INLKKVAREQ RKAKELPPKP SSRPQPSRPP 250
    VQLNAGSQSN RNEYKLYPEL SSYHEKTGSL SQPIEVTALY SFEGQQPGDL 300
    NFQAGDRIIV ISKTDSNFDW WEGKLRGQTG IFPANYVTMN 340
    Length:340
    Mass (Da):37,039
    Last modified:February 26, 2008 - v1
    Checksum:iE270CE133944F421
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC158742 mRNA. Translation: AAI58743.1.
    RefSeqiNP_001102175.1. NM_001108705.2.
    UniGeneiRn.1163.

    Genome annotation databases

    EnsembliENSRNOT00000068208; ENSRNOP00000060428; ENSRNOG00000005522.
    GeneIDi362724.
    KEGGirno:362724.
    UCSCiRGD:1306440. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC158742 mRNA. Translation: AAI58743.1 .
    RefSeqi NP_001102175.1. NM_001108705.2.
    UniGenei Rn.1163.

    3D structure databases

    ProteinModelPortali B0BNA1.
    SMRi B0BNA1. Positions 271-340.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000060428.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000068208 ; ENSRNOP00000060428 ; ENSRNOG00000005522 .
    GeneIDi 362724.
    KEGGi rno:362724.
    UCSCi RGD:1306440. rat.

    Organism-specific databases

    CTDi 26751.
    RGDi 1306440. Sh3yl1.

    Phylogenomic databases

    eggNOGi COG2930.
    GeneTreei ENSGT00510000048137.
    HOGENOMi HOG000215564.
    HOVERGENi HBG108487.
    OMAi ANEKMYN.
    OrthoDBi EOG7MPRFM.
    PhylomeDBi B0BNA1.
    TreeFami TF331022.

    Miscellaneous databases

    NextBioi 681005.

    Gene expression databases

    Genevestigatori B0BNA1.

    Family and domain databases

    InterProi IPR001452. SH3_domain.
    IPR007461. Ysc84_actin-binding.
    [Graphical view ]
    Pfami PF04366. DUF500. 1 hit.
    PF00018. SH3_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00452. SH3DOMAIN.
    SMARTi SM00326. SH3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50044. SSF50044. 1 hit.
    PROSITEi PS50002. SH3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Spleen.

    Entry informationi

    Entry nameiSH3Y1_RAT
    AccessioniPrimary (citable) accession number: B0BNA1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 10, 2008
    Last sequence update: February 26, 2008
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3