B0BBV1 (B0BBV1_CHLTB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcription antitermination protein EMBL CAP06966.1

Gene names

Name:	nusG EMBL CAP06966.1
Ordered Locus Names:	CTLon_0568

Organism

Chlamydia trachomatis serovar L2b (strain UCH-1/proctitis) [Complete proteome] [HAMAP] EMBL CAP06966.1

Taxonomic identifier

471473 [NCBI]

Taxonomic lineage

Bacteria › Chlamydiae › Chlamydiales › Chlamydiaceae › Chlamydia/Chlamydophila group › Chlamydia

Protein attributes

Sequence length	182 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function

Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. SAAS SAAS006645

Ontologies

Keywords
Biological process	Transcription Transcription antitermination SAAS SAAS006645 Transcription regulation Transcription termination SAAS SAAS006645
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	positive regulation of transcription elongation from RNA polymerase II promoter Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B0BBV1 [UniParc]. Last modified February 26, 2008. Version 1. Checksum: E3819AF9AFF304BA	FASTA	182	20,760
	10 20 30 40 50 60 MFKWYVVQVF TAQEKKVKKS LEDFKEASGM SDFIQQIILP SENVMEVKKG EHKIVEKYIW 70 80 90 100 110 120 PGYLLVKMHL TDESWSYVKK TQGVVEFLGG GAPVALSEEE IKNILADLEE KKSGVVQKHK 130 140 150 160 170 180 FEVGSQVKIN DGVFVNFVGV VSEVFHDKGR LSVMVSIFGR ETRVDDLEFW QVEEVVPGQE SE

References

[1]

"Chlamydia trachomatis: genome sequence analysis of lymphogranuloma venereum isolates." Thomson N.R., Holden M.T.G., Carder C., Lennard N., Lockey S.J., Marsh P., Skipp P., O'Connor C.D., Goodhead I., Norbertzcak H., Harris B., Ormond D., Rance R., Quail M.A., Parkhill J., Stephens R.S., Clarke I.N. Genome Res. 18:161-171(2008) [PubMed: 18032721] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM884177 Genomic DNA. Translation: CAP06966.1.
RefSeq	YP_001653660.1. NC_010280.2.
3D structure databases
ProteinModelPortal	B0BBV1.
ModBase	Search...
Protein-protein interaction databases
STRING	B0BBV1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5858870.
GenomeReviews	Gene locus CTLon_0568 in contig AM884177_GR.
KEGG	ctl:CTLon_0568.
PATRIC	20382769. VBIChlTra68089_0616.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG751162.
OMA	VASGCEK.
ProtClustDB	PRK05609.
Family and domain databases
InterPro	IPR005824. KOW. IPR001062. Transcrpt_antiterm_NusG. IPR006645. Transcrpt_antiterm_NusG_N. IPR014722. Transl_SH3-like_sub. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.30.30.30. Ribosomal_L2. 1 hit. G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KO	K02601.
Pfam	PF02357. NusG. 1 hit. [Graphical view]
PRINTS	PR00338. NUSGTNSCPFCT.
SMART	SM00739. KOW. 1 hit. SM00738. NGN. 1 hit. [Graphical view]
SUPFAM	SSF82679. Transcrpt_antiterm_NusG_N. 1 hit. SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR00922. NusG. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B0BBV1_CHLTB

Accession

Primary (citable) accession number: B0BBV1

Entry history

Integrated into UniProtKB/TrEMBL:	February 26, 2008
Last sequence update:	February 26, 2008
Last modified:	January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)