B0B9N3 (RL13_CHLT2) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L13

Gene names

Name:	rplM
Ordered Locus Names:	CTL0380

Organism

Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) [Complete proteome] [HAMAP]

Taxonomic identifier

471472 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Chlamydiae/Verrucomicrobia group › Chlamydiae › Chlamydiia › Chlamydiales › Chlamydiaceae › Chlamydia/Chlamydophila group › Chlamydia › Chlamydia trachomatis

Protein attributes

Sequence length	150 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly By similarity. HAMAP-Rule MF_01366
Subunit structure	Part of the 50S ribosomal subunit By similarity.
Sequence similarities	Belongs to the ribosomal protein L13P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 150	150	50S ribosomal protein L13 HAMAP-Rule MF_01366		PRO_1000144106

Sequences

	Sequence		Length	Mass (Da)
	B0B9N3 [UniParc]. Last modified February 26, 2008. Version 1. Checksum: F0F92E06521D597A	FASTA	150	16,850
	10 20 30 40 50 60 MEKRKDTKTT LAKASDDRNK AWYVVNAEGK TLGRLSSEVA KILRGKHKVT FTPHVAMGDG 70 80 90 100 110 120 VIVINAEKVR LTGAKRAQKV YHYYTGFISG MREVPFENMI ARKPAYVIEH AVKGMLPKTK 130 140 150 LGRRQMKSLR VLKGSSYAQY EAIKPIVLDA

References

[1]

"Chlamydia trachomatis: genome sequence analysis of lymphogranuloma venereum isolates." Thomson N.R., Holden M.T.G., Carder C., Lennard N., Lockey S.J., Marsh P., Skipp P., O'Connor C.D., Goodhead I., Norbertzcak H., Harris B., Ormond D., Rance R., Quail M.A., Parkhill J., Stephens R.S., Clarke I.N. Genome Res. 18:161-171(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 434/Bu / ATCC VR-902B.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM884176 Genomic DNA. Translation: CAP03820.1.
RefSeq	YP_001654464.1. NC_010287.1.
3D structure databases
ProteinModelPortal	B0B9N3.
SMR	B0B9N3. Positions 8-149.
ModBase	Search...
Protein-protein interaction databases
STRING	471472.CTL0380.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAP03820; CAP03820; CTL0380.
GeneID	5858611.
KEGG	ctb:CTL0380.
PATRIC	20376274. VBIChlTra32542_0411.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0102.
HOGENOM	HOG000225286.
KO	K02871.
OMA	YTPHMDC.
ProtClustDB	PRK09216.
Enzyme and pathway databases
BioCyc	CTRA471472:GJ9M-398-MONOMER.
Family and domain databases
Gene3D	3.90.1180.10. 1 hit.
HAMAP	MF_01366_B. Ribosomal_L13_B.
InterPro	IPR005822. Ribosomal_L13. IPR005823. Ribosomal_L13_bac-type. IPR023563. Ribosomal_L13_CS. IPR023564. Ribosomal_L13_dom. [Graphical view]
PANTHER	PTHR11545. PTHR11545. 1 hit.
Pfam	PF00572. Ribosomal_L13. 1 hit. [Graphical view]
PIRSF	PIRSF002181. Ribosomal_L13. 1 hit.
SUPFAM	SSF52161. Ribosomal_L13. 1 hit.
TIGRFAMs	TIGR01066. rplM_bact. 1 hit.
PROSITE	PS00783. RIBOSOMAL_L13. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL13_CHLT2

Accession

Primary (citable) accession number: B0B9N3

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	February 26, 2008
Last modified:	May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program