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Protein
Submitted name:

cDNA, FLJ79461, highly similar to Aryl hydrocarbon receptor nuclear translocator

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA, FLJ79461, highly similar to Aryl hydrocarbon receptor nuclear translocatorImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiB0AZM1.
PeptideAtlasiB0AZM1.

Expressioni

Gene expression databases

GenevisibleiB0AZM1. HS.

Interactioni

Protein-protein interaction databases

IntActiB0AZM1. 1 interaction.
STRINGi9606.ENSP00000351407.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini74 – 12754BHLH (basic helix-loop-helix)InterPro annotationAdd
BLAST
Domaini146 – 22075PAS (PER-ARNT-SIM)InterPro annotationAdd
BLAST
Domaini353 – 40452PAS (PER-ARNT-SIM)InterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 basic helix-loop-helix (bHLH) domain.UniRule annotation
Contains PAC (PAS-associated C-terminal) domain.SAAS annotation
Contains PAS (PER-ARNT-SIM) domains.SAAS annotation
Contains bHLH (basic helix-loop-helix) domain.SAAS annotation

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

eggNOGiENOG410IQ5T. Eukaryota.
ENOG410XVHF. LUCA.
HOGENOMiHOG000234380.
HOVERGENiHBG000164.

Family and domain databases

Gene3Di4.10.280.10. 1 hit.
InterProiIPR011598. bHLH_dom.
IPR001067. Nuc_translocat.
IPR001610. PAC.
IPR000014. PAS.
IPR013767. PAS_fold.
[Graphical view]
PfamiPF00010. HLH. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view]
PRINTSiPR00785. NCTRNSLOCATR.
SMARTiSM00353. HLH. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF47459. SSF47459. 1 hit.
SSF55785. SSF55785. 4 hits.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50888. BHLH. 1 hit.
PS50112. PAS. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B0AZM1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAATTANPEM TSDVPSLGPA IASGNSGPGI QGGGAIVQRA IKRRPGLDFD
60 70 80 90 100
DDGEGNSKFL RCDDDQMSND KERYARENHS EIERRRRNKM TAYITELSDM
110 120 130 140 150
VPTCSALARK PDKLTILRMA VSHMKSLRGT GNTSTDGSYK PSFLTDQELK
160 170 180 190 200
HLILEATDGF LFIVSCETGR VVYVSDSVTP VLNQPQSEWF GSTLYDQVHP
210 220 230 240 250
DDVDKLREQL STSENALTGR ILDLKTGTVK KEGQQSSMRM CMGSRRSFIC
260 270 280 290 300
RMRCGSSSVD PVSVNRLSFV RNRCRNGLGS VKDGEPHFVV VHCTGYIKAW
310 320 330 340 350
PPAGVSLPDD DPEAGQGSKF CLVAIGRLQV TSSPNCTDMS NVCQPTEFIS
360 370 380 390 400
RHNIEGIFTF VDHRCVATVG YQPQELLGKN IVEFCHPEDQ QLLRDSFQQV
410 420 430 440 450
VKLKGQVLSV MFRFRSKNQE WLWMRTSSFT FQNPYSDEIE YIICTNTNVK
460 470 480 490 500
NSSQEPRPTL SNTIQRPQLG PTANLPLEMG SGQLAPRQQQ QQTELDMVPG
510 520 530 540 550
RDGLASYNHS QVVQPVTTTG PEHSKPLEKS DGLFAQDRDP RFSEIYHNIN
560 570 580 590 600
ADQSKGISSS TVPATQQLFS QGNTFPPTPR PAENFRNSGL APPVTIVQPS
610 620 630 640 650
ASAGQMLAQI SRHSNPTQGA TPTWTPTTRS GFSAQQVATQ ATAKTRTSQF
660 670 680 690 700
GVGSFQTPSS FSSMSLPGAP TASPGAAAYP SLTNRGSNFA PETGQTAGQF
710 720 730 740 750
QTRTAEGVGV WPQWQGQQPH HRSSSSEQHV QQPPAQQPGQ PEVFQEMLSM
760 770
LGDQSNSYNN EEFPDLTMFP PFSE
Length:774
Mass (Da):84,994
Last modified:February 26, 2008 - v1
Checksum:i7DB22949B18F149C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK315812 mRNA. Translation: BAF98703.1.
RefSeqiNP_848514.1. NM_178427.2.
UniGeneiHs.632446.

Genome annotation databases

GeneIDi405.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK315812 mRNA. Translation: BAF98703.1.
RefSeqiNP_848514.1. NM_178427.2.
UniGeneiHs.632446.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiB0AZM1. 1 interaction.
STRINGi9606.ENSP00000351407.

Proteomic databases

PaxDbiB0AZM1.
PeptideAtlasiB0AZM1.

Protocols and materials databases

DNASUi405.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi405.

Organism-specific databases

CTDi405.

Phylogenomic databases

eggNOGiENOG410IQ5T. Eukaryota.
ENOG410XVHF. LUCA.
HOGENOMiHOG000234380.
HOVERGENiHBG000164.

Miscellaneous databases

GenomeRNAii405.

Gene expression databases

GenevisibleiB0AZM1. HS.

Family and domain databases

Gene3Di4.10.280.10. 1 hit.
InterProiIPR011598. bHLH_dom.
IPR001067. Nuc_translocat.
IPR001610. PAC.
IPR000014. PAS.
IPR013767. PAS_fold.
[Graphical view]
PfamiPF00010. HLH. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view]
PRINTSiPR00785. NCTRNSLOCATR.
SMARTiSM00353. HLH. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF47459. SSF47459. 1 hit.
SSF55785. SSF55785. 4 hits.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50888. BHLH. 1 hit.
PS50112. PAS. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB0AZM1_HUMAN
AccessioniPrimary (citable) accession number: B0AZM1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: July 6, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.