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A9WSM2

- A9WSM2_RENSM

UniProt

A9WSM2 - A9WSM2_RENSM

Protein

Glutamate decarboxylase

Gene

RSal33209_2078

Organism
Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 1 (05 Feb 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciRSAL288705:GHX1-2078-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:RSal33209_2078Imported
    OrganismiRenibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235)Imported
    Taxonomic identifieri288705 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeRenibacterium
    ProteomesiUP000002007: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi288705.RSal33209_2078.

    Structurei

    3D structure databases

    ProteinModelPortaliA9WSM2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiAQYYTFL.
    OrthoDBiEOG6TFCPW.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A9WSM2-1 [UniParc]FASTAAdd to Basket

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    MRSTGSRPDR DDQQPIDLNP LFTRPGERTE FPKFTLRKEG SLPETAYQIV    50
    HDDAMLDGNA RQNLATFVGT WMDEHANQLY LESADKNMID KDEYPHTAAI 100
    ETRCWRILAT LWNAPNAEKA IGTSTIGSSE ACMLGGLALK RRWQHARRAA 150
    GLATDKPNLV LSSAVQVCWE KFCNYWDVEP RYVPISEEHR VLDGHDLDKY 200
    VDENTIGVVA ILGVTYTGMY EPVQQIAAAL DQIQANTGLD VRIHVDGASG 250
    AMIAPFLQPD LEWDFHVPRV SSINISGHKY GLVYPGVGWI VWRDASLLPE 300
    DLVFRVSYLG GDMPTFALNF SRPGAQVLLQ YYQFLRLGFD GFEAVQNACR 350
    EVALYLSGEI AGMEPFELWN DGSDIPVFAW RLKPDPERHW DLHQLSDRLR 400
    MSGWQVPSYP MPADLENITV QRIVVRSGFS KNLAADFLGD FREQVAYLES 450
    LPAPVSTNRE STGFRH 466
    Length:466
    Mass (Da):52,535
    Last modified:February 5, 2008 - v1
    Checksum:iBCABF696C8FF9168
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000910 Genomic DNA. Translation: ABY23810.1.
    RefSeqiWP_012245480.1. NC_010168.1.
    YP_001625224.1. NC_010168.1.

    Genome annotation databases

    EnsemblBacteriaiABY23810; ABY23810; RSal33209_2078.
    GeneIDi5822084.
    KEGGirsa:RSal33209_2078.
    PATRICi23077503. VBIRenSal21953_2167.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000910 Genomic DNA. Translation: ABY23810.1 .
    RefSeqi WP_012245480.1. NC_010168.1.
    YP_001625224.1. NC_010168.1.

    3D structure databases

    ProteinModelPortali A9WSM2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 288705.RSal33209_2078.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABY23810 ; ABY23810 ; RSal33209_2078 .
    GeneIDi 5822084.
    KEGGi rsa:RSal33209_2078.
    PATRICi 23077503. VBIRenSal21953_2167.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi AQYYTFL.
    OrthoDBi EOG6TFCPW.

    Enzyme and pathway databases

    BioCyci RSAL288705:GHX1-2078-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the fish pathogen Renibacterium salmoninarum suggests reductive evolution away from an environmental Arthrobacter ancestor."
      Wiens G.D., Rockey D.D., Wu Z., Chang J., Levy R., Crane S., Chen D.S., Capri G.R., Burnett J.R., Sudheesh P.S., Schipma M.J., Burd H., Bhattacharyya A., Rhodes L.D., Kaul R., Strom M.S.
      J. Bacteriol. 190:6970-6982(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235Imported.

    Entry informationi

    Entry nameiA9WSM2_RENSM
    AccessioniPrimary (citable) accession number: A9WSM2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 5, 2008
    Last sequence update: February 5, 2008
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3