A9WSM2 (A9WSM2_RENSM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL ABY23810.1
EC=4.1.1.15 EMBL ABY23810.1

Gene names

Ordered Locus Names:

RSal33209_2078

Organism

Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) [Complete proteome] [HAMAP] EMBL ABY23810.1

Taxonomic identifier

288705 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Renibacterium › Renibacterium salmoninarum

Protein attributes

Sequence length	466 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL ABY23810.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9WSM2 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: BCABF696C8FF9168	FASTA	466	52,535
	10 20 30 40 50 60 MRSTGSRPDR DDQQPIDLNP LFTRPGERTE FPKFTLRKEG SLPETAYQIV HDDAMLDGNA 70 80 90 100 110 120 RQNLATFVGT WMDEHANQLY LESADKNMID KDEYPHTAAI ETRCWRILAT LWNAPNAEKA 130 140 150 160 170 180 IGTSTIGSSE ACMLGGLALK RRWQHARRAA GLATDKPNLV LSSAVQVCWE KFCNYWDVEP 190 200 210 220 230 240 RYVPISEEHR VLDGHDLDKY VDENTIGVVA ILGVTYTGMY EPVQQIAAAL DQIQANTGLD 250 260 270 280 290 300 VRIHVDGASG AMIAPFLQPD LEWDFHVPRV SSINISGHKY GLVYPGVGWI VWRDASLLPE 310 320 330 340 350 360 DLVFRVSYLG GDMPTFALNF SRPGAQVLLQ YYQFLRLGFD GFEAVQNACR EVALYLSGEI 370 380 390 400 410 420 AGMEPFELWN DGSDIPVFAW RLKPDPERHW DLHQLSDRLR MSGWQVPSYP MPADLENITV 430 440 450 460 QRIVVRSGFS KNLAADFLGD FREQVAYLES LPAPVSTNRE STGFRH

References

[1]

"Genome sequence of the fish pathogen Renibacterium salmoninarum suggests reductive evolution away from an environmental Arthrobacter ancestor." Wiens G.D., Rockey D.D., Wu Z., Chang J., Levy R., Crane S., Chen D.S., Capri G.R., Burnett J.R., Sudheesh P.S., Schipma M.J., Burd H., Bhattacharyya A., Rhodes L.D., Kaul R., Strom M.S. J. Bacteriol. 190:6970-6982(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000910 Genomic DNA. Translation: ABY23810.1.
RefSeq	YP_001625224.1. NC_010168.1.
3D structure databases
ProteinModelPortal	A9WSM2.
ModBase	Search...
Protein-protein interaction databases
STRING	288705.RSal33209_2078.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABY23810; ABY23810; RSal33209_2078.
GeneID	5822084.
KEGG	rsa:RSal33209_2078.
PATRIC	23077503. VBIRenSal21953_2167.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000070228.
KO	K01580.
OMA	PMDKEHM.
ProtClustDB	CLSK925941.
Enzyme and pathway databases
BioCyc	RSAL288705:GHX1-2078-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9WSM2_RENSM

Accession

Primary (citable) accession number: A9WSM2

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	May 1, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)