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A9WSM2 (A9WSM2_RENSM) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length466 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
A9WSM2 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: BCABF696C8FF9168

FASTA46652,535
        10         20         30         40         50         60 
MRSTGSRPDR DDQQPIDLNP LFTRPGERTE FPKFTLRKEG SLPETAYQIV HDDAMLDGNA 

        70         80         90        100        110        120 
RQNLATFVGT WMDEHANQLY LESADKNMID KDEYPHTAAI ETRCWRILAT LWNAPNAEKA 

       130        140        150        160        170        180 
IGTSTIGSSE ACMLGGLALK RRWQHARRAA GLATDKPNLV LSSAVQVCWE KFCNYWDVEP 

       190        200        210        220        230        240 
RYVPISEEHR VLDGHDLDKY VDENTIGVVA ILGVTYTGMY EPVQQIAAAL DQIQANTGLD 

       250        260        270        280        290        300 
VRIHVDGASG AMIAPFLQPD LEWDFHVPRV SSINISGHKY GLVYPGVGWI VWRDASLLPE 

       310        320        330        340        350        360 
DLVFRVSYLG GDMPTFALNF SRPGAQVLLQ YYQFLRLGFD GFEAVQNACR EVALYLSGEI 

       370        380        390        400        410        420 
AGMEPFELWN DGSDIPVFAW RLKPDPERHW DLHQLSDRLR MSGWQVPSYP MPADLENITV 

       430        440        450        460 
QRIVVRSGFS KNLAADFLGD FREQVAYLES LPAPVSTNRE STGFRH 

« Hide

References

[1]"Genome sequence of the fish pathogen Renibacterium salmoninarum suggests reductive evolution away from an environmental Arthrobacter ancestor."
Wiens G.D., Rockey D.D., Wu Z., Chang J., Levy R., Crane S., Chen D.S., Capri G.R., Burnett J.R., Sudheesh P.S., Schipma M.J., Burd H., Bhattacharyya A., Rhodes L.D., Kaul R., Strom M.S.
J. Bacteriol. 190:6970-6982(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000910 Genomic DNA. Translation: ABY23810.1.
RefSeqYP_001625224.1. NC_010168.1.

3D structure databases

ProteinModelPortalA9WSM2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING288705.RSal33209_2078.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABY23810; ABY23810; RSal33209_2078.
GeneID5822084.
KEGGrsa:RSal33209_2078.
PATRIC23077503. VBIRenSal21953_2167.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAERQTGID.
OrthoDBEOG6TFCPW.
ProtClustDBCLSK925941.

Enzyme and pathway databases

BioCycRSAL288705:GHX1-2078-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9WSM2_RENSM
AccessionPrimary (citable) accession number: A9WSM2
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: November 13, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)