Skip Header

Contribute Send feedback
Read comments (?) or add your own

A9WRN3 (A9WRN3_RENSM) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Cytidylate kinase HAMAP MF_00238

Short name=CK HAMAP MF_00238
EC=2.7.4.25 HAMAP MF_00238
Alternative name(s):
Cytidine monophosphate kinase HAMAP MF_00238
Gene names
Name:cmk HAMAP MF_00238
Ordered Locus Names:RSal33209_2590
OrganismRenibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) [Complete proteome] [HAMAP] EMBL ABY24315.1
Taxonomic identifier288705 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeRenibacterium

Protein attributes

Sequence length244 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (d)CMP = ADP + (d)CDP. HAMAP MF_00238

Subcellular location

Cytoplasm By similarity HAMAP MF_00238.

Sequence similarities

Belongs to the cytidylate kinase family. Type 1 subfamily. HAMAP MF_00238

Ontologies

Keywords
   Cellular componentCytoplasm HAMAP MF_00238
   LigandATP-binding HAMAP MF_00238
Nucleotide-binding
   Molecular functionKinase HAMAP MF_00238 EMBL ABY24315.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processpyrimidine nucleotide metabolic process

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionATP binding

Inferred from electronic annotation. Source: HAMAP

cytidylate kinase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A9WRN3 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: 51C6DD37D039B75F

FASTA24426,152
        10         20         30         40         50         60 
MSASSQLRIG KSLVIAIDGP SGSGKSSVAR EIANRLGLAY QDTGAMYRSL ALVCLENRVA 

        70         80         90        100        110        120 
VQNQAAVEEL AKRFYFEQSF DPGIDMVAAG LDFERALDVT DEIREPQVSA AVSAVAINLG 

       130        140        150        160        170        180 
ARTELIRRQR AAIESVRGRM VVEGRDITTV VAPNAEIRLL LTASEEVRLA RRGAQLASAG 

       190        200        210        220        230        240 
EQQSAEELVQ QVLARDAKDA TVVDFQRAAD GVVTIDSSDL NFEQTVAAVL RLVQESFSVG 


GTDD 

« Hide

References

[1]"Genome sequence of the fish pathogen Renibacterium salmoninarum suggests reductive evolution away from an environmental Arthrobacter ancestor."
Wiens G.D., Rockey D.D., Wu Z., Chang J., Levy R., Crane S., Chen D.S., Capri G.R., Burnett J.R., Sudheesh P.S., Schipma M.J., Burd H., Bhattacharyya A., Rhodes L.D., Kaul R., Strom M.S.
J. Bacteriol. 190:6970-6982(2008) [PubMed: 18723615] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000910 Genomic DNA. Translation: ABY24315.1.
RefSeqYP_001625729.1. NC_010168.1.

3D structure databases

ProteinModelPortalA9WRN3.
ModBaseSearch...

Protein-protein interaction databases

STRINGA9WRN3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5824177.
GenomeReviewsGene locus RSal33209_2590 in contig CP000910_GR.
KEGGrsa:RSal33209_2590.
PATRIC23078561. VBIRenSal21953_2689.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG354377.
OMADIGTVIC.

Enzyme and pathway databases

BioCycRSAL288705:RSAL33209_2590-MONOMER.

Family and domain databases

HAMAPMF_00238. Cytidyl_kinase_type1.
[Tree]
InterProIPR003136. Cytidylate_kin.
IPR011994. Cytidylate_kinase_dom.
[Graphical view]
KOK00945.
PANTHERPTHR21299:SF2. Cytidylate_kin. 1 hit.
PfamPF02224. Cytidylate_kin. 1 hit.
[Graphical view]
TIGRFAMsTIGR00017. Cmk. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9WRN3_RENSM
AccessionPrimary (citable) accession number: A9WRN3
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: January 25, 2012
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)