A9WMX0 (A9WMX0_RENSM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Isoamylase EMBL ABY23453.1
EC=3.2.1.68 EMBL ABY23453.1

Gene names

Ordered Locus Names:

RSal33209_1717

Organism

Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) [Complete proteome] [HAMAP] EMBL ABY23453.1

Taxonomic identifier

288705 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Renibacterium

Protein attributes

Sequence length	540 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABY23453.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro glycogen debranching enzyme activity Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9WMX0 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: F1DA9CC7D8793754	FASTA	540	60,808
	10 20 30 40 50 60 MEVWPGSAYP LGASFDGNGT NFAIFSEVAT AVHLCLIDDG GVETRIPLTE VDGYVWHCYL 70 80 90 100 110 120 PQIRPGQKYG YRVEGPYDPA NGQRCNPNKL LLDPYAKAVS GQVDWDNALF SYDHADPNQR 130 140 150 160 170 180 NDEDSLPHMM LGVVINPFFD WDGDRPPRTP YHRSFIYEAH VKGLTQLHPE VPDEQKGNYA 190 200 210 220 230 240 GVGYPAVIAH LKKLGVRAIE LMPVHQFVQD NTLLDKGLRN YWGYNTIGFF APHNEYSSTG 250 260 270 280 290 300 DQGQQIQEFK AMVRALHRAG IEVILDVVYN HTAEGNQLGP TLSFRGIDNA AYYRLVDDDE 310 320 330 340 350 360 QYYMDYTGTG NSLNVRNPHS LQLLMDSLRY WVTEMHVDGF RFDLASTLAR EFYDVDKLST 370 380 390 400 410 420 FFELIQQDPV VSQVKLIAEP WDVGPGGYQV GNFPPQWTEW NGKYRDTVRD FWRGEPSTLG 430 440 450 460 470 480 EFASRLTGSS DLYEHSGRRP VASINFITAH DGFTLADLVS YNYKHNEANG EGNRDGESHN 490 500 510 520 530 540 RSWNCGVEGA TDDAGIRALR ARQQRNFIAT AMLSQGVPIL VHGDELGRTQ QGNNNAYCQD

References

[1]

"Genome sequence of the fish pathogen Renibacterium salmoninarum suggests reductive evolution away from an environmental Arthrobacter ancestor." Wiens G.D., Rockey D.D., Wu Z., Chang J., Levy R., Crane S., Chen D.S., Capri G.R., Burnett J.R., Sudheesh P.S., Schipma M.J., Burd H., Bhattacharyya A., Rhodes L.D., Kaul R., Strom M.S. J. Bacteriol. 190:6970-6982(2008) [PubMed: 18723615] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000910 Genomic DNA. Translation: ABY23453.1.
RefSeq	YP_001624867.1. NC_010168.1.
3D structure databases
ProteinModelPortal	A9WMX0.
ModBase	Search...
Protein-protein interaction databases
STRING	A9WMX0.
Protein family/group databases
CAZy	CBM48. Carbohydrate-Binding Module Family 48. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5822442.
GenomeReviews	Gene locus RSal33209_1717 in contig CP000910_GR.
KEGG	rsa:RSal33209_1717.
PATRIC	23076729. VBIRenSal21953_1784.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG350946.
OMA	MPDDKRY.
Enzyme and pathway databases
BioCyc	RSAL288705:RSAL33209_1717-MONOMER.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR006047. Glyco_hydro_13_cat_dom. IPR004193. Glyco_hydro_13_N. IPR013781. Glyco_hydro_subgr_catalytic. IPR011837. Glycogen_debranch_debranch. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KO	K02438.
PANTHER	PTHR10357. Alpha_amylase. 1 hit. PTHR10357:SF74. PTHR10357:SF74. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02922. CBM_48. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
TIGRFAMs	TIGR02100. GlgX_debranch. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9WMX0_RENSM

Accession

Primary (citable) accession number: A9WMX0

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)