A9WFP5 (A9WFP5_CHLAA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcription termination/antitermination factor NusG EMBL ABY35395.1

Gene names

Ordered Locus Names:

Caur_2184

Organism

Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) EMBL ABY35395.1

Taxonomic identifier

324602 [NCBI]

Taxonomic lineage

Bacteria › Chloroflexi › Chloroflexales › Chloroflexaceae › Chloroflexus

Protein attributes

Sequence length	187 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function

Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. SAAS SAAS006645

Ontologies

Keywords
Biological process	Transcription Transcription antitermination SAAS SAAS006645 Transcription regulation Transcription termination SAAS SAAS006645
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	positive regulation of transcription elongation from RNA polymerase II promoter Inferred from electronic annotation. Source: InterPro transcription antitermination Inferred from electronic annotation. Source: UniProtKB-KW transcription termination, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9WFP5 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 9ACE7D96A17BC464	FASTA	187	21,773
	10 20 30 40 50 60 MSEEKEKEKE ADDRRWYVIH TYSGYENKVK KNLEHRIASM EMQDQIFRVI VPTEEEIEIK 70 80 90 100 110 120 NGQRRTVNKK IYPGYVLVQM RLTDDSWYVV RNTPGVTSFV GHGNKPTPLD DEEVKAILRQ 130 140 150 160 170 180 MEGETPKVRV SYQKGQAVKI IDGPFTDFEG IVDAIDHERG RVRVLVSFFG REAPVELDFL QVTRLVE

References

[1]

"Complete sequence of Chloroflexus aurantiacus J-10-fl." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Mikhailova N., Pierson B.K., Blankenship R.E., Richardson P. Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29366 / DSM 635 / J-10-fl.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000909 Genomic DNA. Translation: ABY35395.1.
RefSeq	YP_001635784.1. NC_010175.1.
3D structure databases
ProteinModelPortal	A9WFP5.
ModBase	Search...
Protein-protein interaction databases
STRING	A9WFP5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5826642.
GenomeReviews	Gene locus Caur_2184 in contig CP000909_GR.
KEGG	cau:Caur_2184.
PATRIC	21415429. VBIChlAur28763_2471.
Phylogenomic databases
HOGENOM	HBG751162.
OMA	VASGCEK.
PhylomeDB	A9WFP5.
ProtClustDB	CLSK974688.
Family and domain databases
InterPro	IPR005824. KOW. IPR001062. Transcrpt_antiterm_NusG. IPR006645. Transcrpt_antiterm_NusG_N. IPR014722. Transl_SH3-like_sub. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.30.30.30. Ribosomal_L2. 1 hit. G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KO	K02601.
Pfam	PF00467. KOW. 1 hit. PF02357. NusG. 1 hit. [Graphical view]
PRINTS	PR00338. NUSGTNSCPFCT.
SMART	SM00739. KOW. 1 hit. SM00738. NGN. 1 hit. [Graphical view]
SUPFAM	SSF82679. Transcrpt_antiterm_NusG_N. 1 hit. SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR00922. NusG. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9WFP5_CHLAA

Accession

Primary (citable) accession number: A9WFP5

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)