Skip Header

Contribute Send feedback
Read comments (?) or add your own

A9WE23 (DAPAL_CHLAA) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized DAPA-like lyase Caur_1967
EC=4.-.-.-
Gene names
Ordered Locus Names:Caur_1967
OrganismChloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
Taxonomic identifier324602 [NCBI]
Taxonomic lineageBacteria › Chloroflexi › Chloroflexales › Chloroflexaceae › Chloroflexus

Protein attributes

Sequence length299 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subunit structure

Homotetramer By similarity.

Subcellular location

Cytoplasm Potential.

Sequence similarities

Belongs to the DHDPS family.

Ontologies

Keywords
   Cellular componentCytoplasm
   LigandSchiff base
   Molecular functionLyase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionlyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 299299Uncharacterized DAPA-like lyase Caur_1967
PRO_0000340941

Sites

Active site471Charge relay system By similarity
Active site1091Charge relay system By similarity
Active site1381Proton donor By similarity
Active site1681Schiff-base intermediate with substrate By similarity

Sequences

Sequence LengthMass (Da)Tools
A9WE23 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: F28252254D20E9AC

FASTA29931,677
        10         20         30         40         50         60 
MAEPRGIISA MLTPFTSDVG PVDYEWLPGY LRFLADGGLH GVLALGTTGE GPSMSVAERI 

        70         80         90        100        110        120 
RTLEIIMAHR GELSVIAGTG CAALTDTIAL SRAAIDLGVD AILVMPPFYI KQPDETGILA 

       130        140        150        160        170        180 
YFRALCDALP ADARVMLYHI PQVTGVPITR TIIDGLLASH GTQFYGLKDS SGDWEHSKML 

       190        200        210        220        230        240 
IDSYPQLRIF TGSDRLIARA LAGGAAGAIT ALSSAFPKLA RAVFDAFHQG GDVAAAQARL 

       250        260        270        280        290 
SAVRDLVNPI NTPPALKAAL TWTSDLPETA LRLPLLPLSN EEVAALRAAY ERIMAGTTP

« Hide

References

[1]"Complete sequence of Chloroflexus aurantiacus J-10-fl."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Pierson B.K., Blankenship R.E., Richardson P.
Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29366 / DSM 635 / J-10-fl.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000909 Genomic DNA. Translation: ABY35182.1.
RefSeqYP_001635571.1. NC_010175.1.

3D structure databases

ProteinModelPortalA9WE23.
ModBaseSearch...

Protein-protein interaction databases

STRINGA9WE23.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5826418.
GenomeReviewsGene locus Caur_1967 in contig CP000909_GR.
KEGGcau:Caur_1967.
PATRIC21414945. VBIChlAur28763_2236.

Phylogenomic databases

HOGENOMHBG358848.
OMAIAYERIM.
PhylomeDBA9WE23.
ProtClustDBCLSK974852.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002220. Dihydrodipicolinate_synth-like.
IPR020624. Dihydrodipicolinate_synth_CS.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01714.
PANTHERPTHR12128. DHDPS. 1 hit.
PfamPF00701. DHDPS. 1 hit.
[Graphical view]
PIRSFPIRSF001365. DHDPS. 1 hit.
PRINTSPR00146. DHPICSNTHASE.
PROSITEPS00665. DHDPS_1. 1 hit.
PS00666. DHDPS_2. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameDAPAL_CHLAA
AccessionPrimary (citable) accession number: A9WE23
Entry history
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: February 5, 2008
Last modified: January 25, 2012
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents