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A9W8F9 (A9W8F9_METEP) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase HAMAP MF_01201 RuleBase RU000608
EC=5.1.1.1 HAMAP MF_01201 RuleBase RU000608
Gene names
Name:alr HAMAP MF_01201
Ordered Locus Names:Mext_3937
OrganismMethylobacterium extorquens (strain PA1) [Complete proteome] [HAMAP]
Taxonomic identifier419610 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium

Protein attributes

Sequence length342 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the D-alanine required for cell wall biosynthesis By similarity. HAMAP MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP MF_01201 SAAS SAAS009006

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site221Proton acceptor; specific for D-alanine By similarity HAMAP MF_01201
Active site2381Proton acceptor; specific for L-alanine By similarity HAMAP MF_01201

Amino acid modifications

Modified residue221N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01201

Sequences

Sequence LengthMass (Da)Tools
A9W8F9 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: 458A3C730E289E55

FASTA34235,687
        10         20         30         40         50         60 
MVANWRALGA CAPQAECGAV VKADAYGCGL AAVAPALWRA GCRTFFVAHL SEGIAARKIL 

        70         80         90        100        110        120 
PEAALYVLNG LPPGRAEAFR AHRLRPVLGD AQELAEWAEA MQGAGPAALH VDTGMNRLGL 

       130        140        150        160        170        180 
SVAEALALAG DPVIARAGID LVMSHLVSAE RPGDPLNARQ AADFARVRAA FPQMRASLAN 

       190        200        210        220        230        240 
SSGTCLANDA RHDLLRPGYA LFGGNPDPGQ PNPMRPVVRL EATILQVRDV EAGATCGYNA 

       250        260        270        280        290        300 
RWQAPAPRRL ATLSLGYADG YPRSASNSGH ALVGGVPCPI VGLISMDLII LDVTDATQAR 

       310        320        330        340 
RGGTATLIGD SLDIDTVGHA AGTIGYEILT SLGSRYVRNY VE

« Hide

References

[1]"Complete sequence of Methylobacterium extorquens PA1."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Marx C., Richardson P.
Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PA1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000908 Genomic DNA. Translation: ABY32308.1.
RefSeqYP_001641379.1. NC_010172.1.

3D structure databases

ProteinModelPortalA9W8F9.
ModBaseSearch...

Protein-protein interaction databases

STRINGA9W8F9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5831009.
GenomeReviewsGene locus Mext_3937 in contig CP000908_GR.
KEGGmex:Mext_3937.
PATRIC22538501. VBIMetExt98426_3990.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG712172.
OMASMDLIIL.
ProtClustDBCLSK2331904.

Family and domain databases

HAMAPMF_01201. Ala_racemase.
[Tree]
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
Gene3DG3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.
KOK01775.
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. Alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9W8F9_METEP
AccessionPrimary (citable) accession number: A9W8F9
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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