A9W6W1 (A9W6W1_METEP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
tRNA synthetase class II (D K and N) EMBL ABY31393.1

Gene names

Ordered Locus Names:

Mext_3004

Organism

Methylobacterium extorquens (strain PA1) [Complete proteome] [HAMAP]

Taxonomic identifier

419610 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium

Protein attributes

Sequence length	352 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 EMBL ABY31393.1 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lysyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW lysine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9W6W1 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: DECB24FC282A5B09	FASTA	352	39,176
	10 20 30 40 50 60 MSHESSPWWH PGLHADRRPL LLTRNRILAG FRAWFAERDF VEVEAAALQV SPGNEAHLSA 70 80 90 100 110 120 FATEAILPDG GREPLYLHTS PEFACKKLLA AGEPRLFSLA HVFRNRERGA LHHPEFTMLE 130 140 150 160 170 180 WYRAGESYDA LMQDGAALLA LAAETAGVRR LTFRGREADP FAPFERLTLA EAFQRYAAID 190 200 210 220 230 240 LLATVSPDGG TDRDTLADAV MTRGLRVAPD DTWADLFSRV LVGLIEPHLG QGRPTILCEY 250 260 270 280 290 300 PVSEAALARP SPRDPRVAER FELYACGVEL ANAFGELTDP AEQRRRFEAE MAEKARVYGE 310 320 330 340 350 RYPIDEEFLD ALAIMPEASG IALGFDRLVM LATGAPRIDD VIWTPAPRNR SR

References

[1]

"Complete sequence of Methylobacterium extorquens PA1." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Marx C., Richardson P. Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PA1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000908 Genomic DNA. Translation: ABY31393.1.
RefSeq	YP_001640464.1. NC_010172.1.
3D structure databases
ProteinModelPortal	A9W6W1.
ModBase	Search...
Protein-protein interaction databases
STRING	A9W6W1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5835376.
GenomeReviews	Gene locus Mext_3004 in contig CP000908_GR.
KEGG	mex:Mext_3004.
PATRIC	22536584. VBIMetExt98426_3041.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG631383.
OMA	MPEASGI.
ProtClustDB	CLSK2403603.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004525. Lys-tRNA-synth-rel. IPR018149. Lys-tRNA-synth_II_C. [Graphical view]
KO	K04568.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF7. PTHR22594:SF7. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. [Graphical view]
PRINTS	PR00982. TRNASYNTHLYS.
TIGRFAMs	TIGR00462. GenX. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9W6W1_METEP

Accession

Primary (citable) accession number: A9W6W1

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)