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A9W6U8 (A9W6U8_METEP) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
3,4-dihydroxy-2-butanone 4-phosphate synthase EMBL ABY31380.1
Gene names
Ordered Locus Names:Mext_2991
OrganismMethylobacterium extorquens (strain PA1) [Complete proteome] [HAMAP] EMBL ABY31380.1
Taxonomic identifier419610 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium ›

Protein attributes

Sequence length380 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate By similarity. SAAS SAAS017945

Catalytic activity

D-ribulose 5-phosphate = formate + L-3,4-dihydroxybutan-2-one 4-phosphate. SAAS SAAS017945

Cofactor

Binds 2 divalent metal cations per subunit. Magnesium or manganese By similarity. SAAS SAAS017945

Pathway

Cofactor biosynthesis; riboflavin biosynthesis; 2-hydroxy-3-oxobutyl phosphate from D-ribulose 5-phosphate: step 1/1. SAAS SAAS017945

Sequences

Sequence LengthMass (Da)Tools
A9W6U8 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: BAD96E7E572BA0F6

FASTA38040,799
        10         20         30         40         50         60 
MDGGSSIGVT TLFEPLNETK PVPHCSVTEA IEAFARGEIV VVTDDDDREN EGDLVVAASL 

        70         80         90        100        110        120 
CTPEKMAFII RNTCGIVCAP ITLDEARRLH LDPMVASNDA PLGTAFTVTV DVRHGLTTGI 

       130        140        150        160        170        180 
SAEQRCNTVR ALANGNMGAG DFVRPGHVFP LIARDGGVLM RSGHTEAAVD LCKLAGLPPV 

       190        200        210        220        230        240 
GVICELANDD GTVMKGPQID AFSEQHNLKR VSVADLIAYR QARDRLVERV GTFPVKTEFG 

       250        260        270        280        290        300 
AMTGYAYVTP FEPIQQFAFV HGAIGDGRNM PVRLHRSNVV ADVIEGGGQI ESVMRRFAKE 

       310        320        330        340        350        360 
GRGILVYLRD GTAGVPLNRY AEEEGAEAQR VRQWREVGLG AQILRDLGVV SIRNLSSSSR 

       370        380 
SYVGLSGFGI ELVSDEPLEG

« Hide

References

[1]"Complete sequence of Methylobacterium extorquens PA1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Marx C., Richardson P.
Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PA1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000908 Genomic DNA. Translation: ABY31380.1.
RefSeqYP_001640451.1. NC_010172.1.

3D structure databases

ProteinModelPortalA9W6U8.
ModBaseSearch...

Protein-protein interaction databases

STRING419610.Mext_2991.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABY31380; ABY31380; Mext_2991.
GeneID5835300.
KEGGmex:Mext_2991.
PATRIC22536554. VBIMetExt98426_3026.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0108.
HOGENOMHOG000115440.
KOK14652.
OMAERTNTVR.
ProtClustDBCLSK864740.

Enzyme and pathway databases

BioCycMEXT419610:GI32-3041-MONOMER.
UniPathwayUPA00275; UER00399.

Family and domain databases

Gene3D3.90.870.10. 1 hit.
HAMAPMF_00180. RibB.
InterProIPR017945. DHBP_synth_RibB-like_a/b_dom.
IPR000422. DHBP_synthase_RibB.
IPR000926. GTP_CycHdrlaseII_RibA.
IPR016299. Riboflavin_synth_RibBA.
[Graphical view]
PfamPF00926. DHBP_synthase. 1 hit.
PF00925. GTP_cyclohydro2. 1 hit.
[Graphical view]
PIRSFPIRSF001259. RibA. 1 hit.
SUPFAMSSF55821. DHBP_synth_RibB-like_a/b_dom. 1 hit.
TIGRFAMsTIGR00506. ribB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9W6U8_METEP
AccessionPrimary (citable) accession number: A9W6U8
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 1, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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