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A9VZ32

- A9VZ32_METEP

UniProt

A9VZ32 - A9VZ32_METEP

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Mext_3237
Organism
Methylobacterium extorquens (strain PA1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMEXT419610:GI32-3289-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mext_3237Imported
OrganismiMethylobacterium extorquens (strain PA1)Imported
Taxonomic identifieri419610 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium
ProteomesiUP000008546: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi419610.Mext_3237.

Structurei

3D structure databases

ProteinModelPortaliA9VZ32.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiNRHKSGV.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9VZ32-1 [UniParc]FASTAAdd to Basket

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MNDFAHLLDR LAYEPRRNAK LRLLQDFFAG TPDPERGWAL AAMTGGLTFR    50
EAKPALIRGL VEERVDPVLF SLSHNYVGDL AETTALIWPG PEETPSLRMR 100
GEGALKDEAL SESPPHRRLP ARTADEVTES LSPQTGRGDP PGPGHNNPPP 150
SVPTLAEVVE TLASTPKREL PQHLAHWLDA LDETGRWALL KLVTGNLRVG 200
VSARLAKTAV GVLGGHEADA VEEVWHGLKP PYTELFAWVE GRGERPESRN 250
PAPFRPPMLS HPVEEFEDLD KLEPEAFSAE WKWDGIRVQL AGGRDGQGRQ 300
VQKVYSRTGE DISDAFPDLA EAITFDGAID GELLILREGR VQSFNVLQQR 350
LNRKAVTGKL LEEFPAHVRA YDVLAAEGED LRPLPFAERR PRLDALVRRL 400
DHARIDLSPL VPFTTWDEVA AARADPASAG AGADADAIEG VMLKRLNSSY 450
LPGRPKGPWW KWKREPYVVD AVMMYAQRGH GKRSSFYSDY TFGCWREGAE 500
GEELVPVGKA YHGFTDAELQ KLDRYVRNHT TKRFGPVREV AYGREAGLVL 550
EIAFEGVQRS TRHKSGVAMR FPRVSRIRWD KPAAEADRVD VLERILARGE 600
REVAPGAAME ASE 613
Length:613
Mass (Da):68,172
Last modified:February 5, 2008 - v1
Checksum:i35A2C1803520B41E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000908 Genomic DNA. Translation: ABY31624.1.
RefSeqiWP_012254513.1. NC_010172.1.
YP_001640695.1. NC_010172.1.

Genome annotation databases

EnsemblBacteriaiABY31624; ABY31624; Mext_3237.
GeneIDi5835410.
KEGGimex:Mext_3237.
PATRICi22537064. VBIMetExt98426_3279.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000908 Genomic DNA. Translation: ABY31624.1 .
RefSeqi WP_012254513.1. NC_010172.1.
YP_001640695.1. NC_010172.1.

3D structure databases

ProteinModelPortali A9VZ32.
ModBasei Search...

Protein-protein interaction databases

STRINGi 419610.Mext_3237.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABY31624 ; ABY31624 ; Mext_3237 .
GeneIDi 5835410.
KEGGi mex:Mext_3237.
PATRICi 22537064. VBIMetExt98426_3279.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi NRHKSGV.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci MEXT419610:GI32-3289-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PA1Imported.

Entry informationi

Entry nameiA9VZ32_METEP
AccessioniPrimary (citable) accession number: A9VZ32
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: September 3, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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