A9VZ32 (A9VZ32_METEP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ABY31624.1

Gene names

Ordered Locus Names:

Mext_3237

Organism

Methylobacterium extorquens (strain PA1) [Complete proteome] [HAMAP] EMBL ABY31624.1

Taxonomic identifier

419610 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium › Methylobacterium extorquens group › Methylobacterium extorquens

Protein attributes

Sequence length	613 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABY31624.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9VZ32 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 35A2C1803520B41E	FASTA	613	68,172
	10 20 30 40 50 60 MNDFAHLLDR LAYEPRRNAK LRLLQDFFAG TPDPERGWAL AAMTGGLTFR EAKPALIRGL 70 80 90 100 110 120 VEERVDPVLF SLSHNYVGDL AETTALIWPG PEETPSLRMR GEGALKDEAL SESPPHRRLP 130 140 150 160 170 180 ARTADEVTES LSPQTGRGDP PGPGHNNPPP SVPTLAEVVE TLASTPKREL PQHLAHWLDA 190 200 210 220 230 240 LDETGRWALL KLVTGNLRVG VSARLAKTAV GVLGGHEADA VEEVWHGLKP PYTELFAWVE 250 260 270 280 290 300 GRGERPESRN PAPFRPPMLS HPVEEFEDLD KLEPEAFSAE WKWDGIRVQL AGGRDGQGRQ 310 320 330 340 350 360 VQKVYSRTGE DISDAFPDLA EAITFDGAID GELLILREGR VQSFNVLQQR LNRKAVTGKL 370 380 390 400 410 420 LEEFPAHVRA YDVLAAEGED LRPLPFAERR PRLDALVRRL DHARIDLSPL VPFTTWDEVA 430 440 450 460 470 480 AARADPASAG AGADADAIEG VMLKRLNSSY LPGRPKGPWW KWKREPYVVD AVMMYAQRGH 490 500 510 520 530 540 GKRSSFYSDY TFGCWREGAE GEELVPVGKA YHGFTDAELQ KLDRYVRNHT TKRFGPVREV 550 560 570 580 590 600 AYGREAGLVL EIAFEGVQRS TRHKSGVAMR FPRVSRIRWD KPAAEADRVD VLERILARGE 610 REVAPGAAME ASE

References

[1]

"Complete sequence of Methylobacterium extorquens PA1." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Marx C., Richardson P. Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PA1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000908 Genomic DNA. Translation: ABY31624.1.
RefSeq	YP_001640695.1. NC_010172.1.
3D structure databases
ProteinModelPortal	A9VZ32.
ModBase	Search...
Protein-protein interaction databases
STRING	419610.Mext_3237.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABY31624; ABY31624; Mext_3237.
GeneID	5835410.
KEGG	mex:Mext_3237.
PATRIC	22537064. VBIMetExt98426_3279.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000036007.
KO	K01971.
OMA	AYDLLEW.
ProtClustDB	CLSK2331597.
Enzyme and pathway databases
BioCyc	MEXT419610:GI32-3289-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9VZ32_METEP

Accession

Primary (citable) accession number: A9VZ32

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)