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A9VZ32 (A9VZ32_METEP) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mext_3237 EMBL ABY31624.1
OrganismMethylobacterium extorquens (strain PA1) [Complete proteome] [HAMAP] EMBL ABY31624.1
Taxonomic identifier419610 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium

Protein attributes

Sequence length613 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A9VZ32 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: 35A2C1803520B41E

FASTA61368,172
        10         20         30         40         50         60 
MNDFAHLLDR LAYEPRRNAK LRLLQDFFAG TPDPERGWAL AAMTGGLTFR EAKPALIRGL 

        70         80         90        100        110        120 
VEERVDPVLF SLSHNYVGDL AETTALIWPG PEETPSLRMR GEGALKDEAL SESPPHRRLP 

       130        140        150        160        170        180 
ARTADEVTES LSPQTGRGDP PGPGHNNPPP SVPTLAEVVE TLASTPKREL PQHLAHWLDA 

       190        200        210        220        230        240 
LDETGRWALL KLVTGNLRVG VSARLAKTAV GVLGGHEADA VEEVWHGLKP PYTELFAWVE 

       250        260        270        280        290        300 
GRGERPESRN PAPFRPPMLS HPVEEFEDLD KLEPEAFSAE WKWDGIRVQL AGGRDGQGRQ 

       310        320        330        340        350        360 
VQKVYSRTGE DISDAFPDLA EAITFDGAID GELLILREGR VQSFNVLQQR LNRKAVTGKL 

       370        380        390        400        410        420 
LEEFPAHVRA YDVLAAEGED LRPLPFAERR PRLDALVRRL DHARIDLSPL VPFTTWDEVA 

       430        440        450        460        470        480 
AARADPASAG AGADADAIEG VMLKRLNSSY LPGRPKGPWW KWKREPYVVD AVMMYAQRGH 

       490        500        510        520        530        540 
GKRSSFYSDY TFGCWREGAE GEELVPVGKA YHGFTDAELQ KLDRYVRNHT TKRFGPVREV 

       550        560        570        580        590        600 
AYGREAGLVL EIAFEGVQRS TRHKSGVAMR FPRVSRIRWD KPAAEADRVD VLERILARGE 

       610 
REVAPGAAME ASE 

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References

[1]"Complete sequence of Methylobacterium extorquens PA1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Marx C., Richardson P.
Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PA1 EMBL ABY31624.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000908 Genomic DNA. Translation: ABY31624.1.
RefSeqYP_001640695.1. NC_010172.1.

3D structure databases

ProteinModelPortalA9VZ32.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING419610.Mext_3237.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABY31624; ABY31624; Mext_3237.
GeneID5835410.
KEGGmex:Mext_3237.
PATRIC22537064. VBIMetExt98426_3279.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMANRHKSGV.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycMEXT419610:GI32-3289-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9VZ32_METEP
AccessionPrimary (citable) accession number: A9VZ32
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 14, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)