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A9VZ32

- A9VZ32_METEP

UniProt

A9VZ32 - A9VZ32_METEP

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mext_3237

Organism
Methylobacterium extorquens (strain PA1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMEXT419610:GI32-3289-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mext_3237Imported
OrganismiMethylobacterium extorquens (strain PA1)Imported
Taxonomic identifieri419610 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium
ProteomesiUP000008546: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi419610.Mext_3237.

Structurei

3D structure databases

ProteinModelPortaliA9VZ32.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiNRHKSGV.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9VZ32-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNDFAHLLDR LAYEPRRNAK LRLLQDFFAG TPDPERGWAL AAMTGGLTFR
60 70 80 90 100
EAKPALIRGL VEERVDPVLF SLSHNYVGDL AETTALIWPG PEETPSLRMR
110 120 130 140 150
GEGALKDEAL SESPPHRRLP ARTADEVTES LSPQTGRGDP PGPGHNNPPP
160 170 180 190 200
SVPTLAEVVE TLASTPKREL PQHLAHWLDA LDETGRWALL KLVTGNLRVG
210 220 230 240 250
VSARLAKTAV GVLGGHEADA VEEVWHGLKP PYTELFAWVE GRGERPESRN
260 270 280 290 300
PAPFRPPMLS HPVEEFEDLD KLEPEAFSAE WKWDGIRVQL AGGRDGQGRQ
310 320 330 340 350
VQKVYSRTGE DISDAFPDLA EAITFDGAID GELLILREGR VQSFNVLQQR
360 370 380 390 400
LNRKAVTGKL LEEFPAHVRA YDVLAAEGED LRPLPFAERR PRLDALVRRL
410 420 430 440 450
DHARIDLSPL VPFTTWDEVA AARADPASAG AGADADAIEG VMLKRLNSSY
460 470 480 490 500
LPGRPKGPWW KWKREPYVVD AVMMYAQRGH GKRSSFYSDY TFGCWREGAE
510 520 530 540 550
GEELVPVGKA YHGFTDAELQ KLDRYVRNHT TKRFGPVREV AYGREAGLVL
560 570 580 590 600
EIAFEGVQRS TRHKSGVAMR FPRVSRIRWD KPAAEADRVD VLERILARGE
610
REVAPGAAME ASE
Length:613
Mass (Da):68,172
Last modified:February 5, 2008 - v1
Checksum:i35A2C1803520B41E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000908 Genomic DNA. Translation: ABY31624.1.
RefSeqiWP_012254513.1. NC_010172.1.
YP_001640695.1. NC_010172.1.

Genome annotation databases

EnsemblBacteriaiABY31624; ABY31624; Mext_3237.
GeneIDi5835410.
KEGGimex:Mext_3237.
PATRICi22537064. VBIMetExt98426_3279.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000908 Genomic DNA. Translation: ABY31624.1 .
RefSeqi WP_012254513.1. NC_010172.1.
YP_001640695.1. NC_010172.1.

3D structure databases

ProteinModelPortali A9VZ32.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 419610.Mext_3237.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABY31624 ; ABY31624 ; Mext_3237 .
GeneIDi 5835410.
KEGGi mex:Mext_3237.
PATRICi 22537064. VBIMetExt98426_3279.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi NRHKSGV.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci MEXT419610:GI32-3289-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PA1Imported.

Entry informationi

Entry nameiA9VZ32_METEP
AccessioniPrimary (citable) accession number: A9VZ32
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: October 1, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3