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A9VZ32

- A9VZ32_METEP

UniProt

A9VZ32 - A9VZ32_METEP

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mext_3237

Organism
Methylobacterium extorquens (strain PA1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (05 Feb 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMEXT419610:GI32-3289-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Mext_3237Imported
    OrganismiMethylobacterium extorquens (strain PA1)Imported
    Taxonomic identifieri419610 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium
    ProteomesiUP000008546: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi419610.Mext_3237.

    Structurei

    3D structure databases

    ProteinModelPortaliA9VZ32.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiNRHKSGV.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A9VZ32-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNDFAHLLDR LAYEPRRNAK LRLLQDFFAG TPDPERGWAL AAMTGGLTFR    50
    EAKPALIRGL VEERVDPVLF SLSHNYVGDL AETTALIWPG PEETPSLRMR 100
    GEGALKDEAL SESPPHRRLP ARTADEVTES LSPQTGRGDP PGPGHNNPPP 150
    SVPTLAEVVE TLASTPKREL PQHLAHWLDA LDETGRWALL KLVTGNLRVG 200
    VSARLAKTAV GVLGGHEADA VEEVWHGLKP PYTELFAWVE GRGERPESRN 250
    PAPFRPPMLS HPVEEFEDLD KLEPEAFSAE WKWDGIRVQL AGGRDGQGRQ 300
    VQKVYSRTGE DISDAFPDLA EAITFDGAID GELLILREGR VQSFNVLQQR 350
    LNRKAVTGKL LEEFPAHVRA YDVLAAEGED LRPLPFAERR PRLDALVRRL 400
    DHARIDLSPL VPFTTWDEVA AARADPASAG AGADADAIEG VMLKRLNSSY 450
    LPGRPKGPWW KWKREPYVVD AVMMYAQRGH GKRSSFYSDY TFGCWREGAE 500
    GEELVPVGKA YHGFTDAELQ KLDRYVRNHT TKRFGPVREV AYGREAGLVL 550
    EIAFEGVQRS TRHKSGVAMR FPRVSRIRWD KPAAEADRVD VLERILARGE 600
    REVAPGAAME ASE 613
    Length:613
    Mass (Da):68,172
    Last modified:February 5, 2008 - v1
    Checksum:i35A2C1803520B41E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000908 Genomic DNA. Translation: ABY31624.1.
    RefSeqiWP_012254513.1. NC_010172.1.
    YP_001640695.1. NC_010172.1.

    Genome annotation databases

    EnsemblBacteriaiABY31624; ABY31624; Mext_3237.
    GeneIDi5835410.
    KEGGimex:Mext_3237.
    PATRICi22537064. VBIMetExt98426_3279.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000908 Genomic DNA. Translation: ABY31624.1 .
    RefSeqi WP_012254513.1. NC_010172.1.
    YP_001640695.1. NC_010172.1.

    3D structure databases

    ProteinModelPortali A9VZ32.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 419610.Mext_3237.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABY31624 ; ABY31624 ; Mext_3237 .
    GeneIDi 5835410.
    KEGGi mex:Mext_3237.
    PATRICi 22537064. VBIMetExt98426_3279.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi NRHKSGV.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci MEXT419610:GI32-3289-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PA1Imported.

    Entry informationi

    Entry nameiA9VZ32_METEP
    AccessioniPrimary (citable) accession number: A9VZ32
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 5, 2008
    Last sequence update: February 5, 2008
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3