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A9VMV8

- GLGB_BACWK

UniProt

A9VMV8 - GLGB_BACWK

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Bacillus weihenstephanensis (strain KBAB4)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei309 – 3091NucleophileUniRule annotation
Active sitei352 – 3521Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciBWEI315730:GHRU-4828-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:BcerKBAB4_4710
OrganismiBacillus weihenstephanensis (strain KBAB4)
Taxonomic identifieri315730 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group
ProteomesiUP000002154: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 6456451,4-alpha-glucan branching enzyme GlgBPRO_1000131811Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi315730.BcerKBAB4_4710.

Structurei

3D structure databases

ProteinModelPortaliA9VMV8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiISEGRHE.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

A9VMV8 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDVINCEEVK RDEFHTEKYY DSYNIFGAHI VTEDGMRGVR CTVWAPHAKA
60 70 80 90 100
MSVVGDFNEW DYEQHKMLQV TEEGIWSLFV PHIEENEIYK YAIETMDGDV
110 120 130 140 150
ILKADPYAVY AEVRPNTASV VFDIEGYEWN DKNWIRKRKK KSIYKEAMTV
160 170 180 190 200
YELHFGSWKK KEDGALYSYR EMAEELIPYV VEHQFTHIEI MPLVEHPYDR
210 220 230 240 250
SWGYQGTGYY AATSRFGTPH DLMYFVDECH KYGIGVILDW VPGHFCKDAH
260 270 280 290 300
GLYLFDGTPT YEYKDRDVQE NLVWGTVNFD LGKREVRNFL ISNALFWMKY
310 320 330 340 350
FHIDGFRVDA VANMLYWNKE GKEQSNEHAV SFLRELNEAV FAEDEEFLMT
360 370 380 390 400
AEDSTAWPLV TAPTYEGGLG FNYKWNMGWM NDVLKYMECA PEYRKYIHEK
410 420 430 440 450
MTFSLIYAHS ENFILPLSHD EVVHGKKSLL NKMPGDYWDK FAQLRLLYGY
460 470 480 490 500
FFTHPGKKLL FMGGEFGQFD EWKDLEDLDW NLHDFEMHRN MHDYFKELIA
510 520 530 540 550
LYKRSKPLWQ LDHSPEGFQW IDANNNEQSI FSFIRQGDKQ EDALVVVCNF
560 570 580 590 600
TKATYENYKV GVPDFEYYNE ILNSDSAQYG GSGQVNKKRL KTILEPYHNQ
610 620 630 640
AAHVEITIPP FGVSILRPVK TRKGSKKQDG SKTKVRSNVT SRGKR
Length:645
Mass (Da):75,819
Last modified:February 5, 2008 - v1
Checksum:i4BF94A58401C1A13
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000903 Genomic DNA. Translation: ABY45863.1.
RefSeqiYP_001647491.1. NC_010184.1.

Genome annotation databases

EnsemblBacteriaiABY45863; ABY45863; BcerKBAB4_4710.
GeneIDi5844925.
KEGGibwe:BcerKBAB4_4710.
PATRICi19014103. VBIBacWei55973_5364.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000903 Genomic DNA. Translation: ABY45863.1 .
RefSeqi YP_001647491.1. NC_010184.1.

3D structure databases

ProteinModelPortali A9VMV8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 315730.BcerKBAB4_4710.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABY45863 ; ABY45863 ; BcerKBAB4_4710 .
GeneIDi 5844925.
KEGGi bwe:BcerKBAB4_4710.
PATRICi 19014103. VBIBacWei55973_5364.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi ISEGRHE.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci BWEI315730:GHRU-4828-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KBAB4.

Entry informationi

Entry nameiGLGB_BACWK
AccessioniPrimary (citable) accession number: A9VMV8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: February 5, 2008
Last modified: October 1, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3