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Protein
Submitted name:

Predicted protein

Gene

28021

Organism
Monosiga brevicollis (Choanoflagellate)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. DNA-directed RNA polymerase activity Source: InterPro

GO - Biological processi

  1. transcription from RNA polymerase III promoter Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:28021Imported
OrganismiMonosiga brevicollis (Choanoflagellate)Imported
Taxonomic identifieri81824 [NCBI]
Taxonomic lineageiEukaryotaChoanoflagellidaCodonosigidaeMonosiga
ProteomesiUP000001357 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. DNA-directed RNA polymerase III complex Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi81824.JGI28021.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG287542.
InParanoidiA9V6Z2.
KOiK03026.

Family and domain databases

Gene3Di3.60.10.10. 1 hit.
InterProiIPR005135. Endo/exonuclease/phosphatase.
IPR007811. RPC4.
[Graphical view]
PANTHERiPTHR13408. PTHR13408. 1 hit.
PfamiPF03372. Exo_endo_phos. 1 hit.
PF05132. RNA_pol_Rpc4. 1 hit.
[Graphical view]
SUPFAMiSSF56219. SSF56219. 1 hit.

Sequencei

Sequence statusi: Complete.

A9V6Z2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGDQGSAGGG GAPSMQPLVA VAVAVVQLAP PRGARPPSSV VLRNLRLKSP
60 70 80 90 100
RPVQPQVTEV PQQVQMIANI PITKRQPEAV AAQLIVAEAV VAVAVVPTAS
110 120 130 140 150
PTRTMVSSQK VLRRGLEQED GGDYESDSDI DEDAPAYGGS WLNETTAEQR
160 170 180 190 200
PTFLPMHDKK LQKQVLPPGI VPDDDEDTVA ADPAGSAPQH PCFGFVPRAL
210 220 230 240 250
ASCRVFSRSS CASQDEESRL LFLQFPDMLP GLMINGQLGT LPEDVEPTGA
260 270 280 290 300
ERCANLRDLP AGIIGRLRIR RSGKMELVMG NVTFEVHEGT RASHLQELMM
310 320 330 340 350
IDHDGGQPTA YNLGQVDRKF IVAPDVSTAF QRSVCSALRS APCPYRIATP
360 370 380 390 400
RALGSSAADS HRLRLITFNV LAPCHKRVGQ GLRESAFASV SIQRQSDILS
410 420 430 440 450
FLCNRYQPTA LCLQEFWFDS SMHDLYREQL GQKFHRFMLK RPGRIHDGLL
460 470 480 490 500
MALEAPRLQV ISQRRIVHDY AYRVTLMLHL RFRPHTNPDT SDYIDFILCN
510 520 530 540 550
THLTYPARTE DHDLRLRHTR HLLTELDAFE RECGLRRSLV VGDFNGNLSS
560 570 580 590 600
ASCRAMLEYV SLRSYLRVMM SCLALSVRGL PVVDSCVASL PIQPRVCFLL

W
Length:601
Mass (Da):66,495
Last modified:February 4, 2008 - v1
Checksum:iD0D759CA256E786D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH991564 Genomic DNA. Translation: EDQ86630.1.
RefSeqiXP_001748466.1. XM_001748414.1.

Genome annotation databases

GeneIDi5893720.
KEGGimbr:MONBRDRAFT_28021.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH991564 Genomic DNA. Translation: EDQ86630.1.
RefSeqiXP_001748466.1. XM_001748414.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi81824.JGI28021.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5893720.
KEGGimbr:MONBRDRAFT_28021.

Phylogenomic databases

eggNOGiNOG287542.
InParanoidiA9V6Z2.
KOiK03026.

Family and domain databases

Gene3Di3.60.10.10. 1 hit.
InterProiIPR005135. Endo/exonuclease/phosphatase.
IPR007811. RPC4.
[Graphical view]
PANTHERiPTHR13408. PTHR13408. 1 hit.
PfamiPF03372. Exo_endo_phos. 1 hit.
PF05132. RNA_pol_Rpc4. 1 hit.
[Graphical view]
SUPFAMiSSF56219. SSF56219. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MX1 / ATCC 50154Imported.

Entry informationi

Entry nameiA9V6Z2_MONBE
AccessioniPrimary (citable) accession number: A9V6Z2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 4, 2008
Last sequence update: February 4, 2008
Last modified: January 6, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.