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Protein
Submitted name:

Predicted protein

Gene

27108

Organism
Monosiga brevicollis (Choanoflagellate)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA photolyase activity Source: InterPro

GO - Biological processi

  1. DNA repair Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:27108Imported
OrganismiMonosiga brevicollis (Choanoflagellate)Imported
Taxonomic identifieri81824 [NCBI]
Taxonomic lineageiEukaryotaChoanoflagellidaCodonosigidaeMonosiga
ProteomesiUP000001357 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi81824.JGI27108.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0415.
InParanoidiA9V4B6.
KOiK02295.
OMAiRWRFLQQ.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
InterProiIPR006050. DNA_photolyase_N.
IPR005101. Photolyase_FAD-bd/Cryptochr_C.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PfamiPF00875. DNA_photolyase. 1 hit.
PF03441. FAD_binding_7. 1 hit.
[Graphical view]
SUPFAMiSSF48173. SSF48173. 1 hit.
SSF52425. SSF52425. 1 hit.
PROSITEiPS51645. PHR_CRY_ALPHA_BETA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9V4B6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSSSISLHW FRKGQRLHDN PALWRALRGA TQVYPVFVID PHFAKPENVG
60 70 80 90 100
VLRYNFLLES LKDLDEQLRG LGSRLYVLRG KPEEQLPKKF KEWKVTRLTY
110 120 130 140 150
ELDTEPYARV RDAAINDLAK KHNVEVIAEA GHMLHDPESY LKKCGGASKD
160 170 180 190 200
RQDKSYDVPT LKEMGYSPIK APQMVLFPGG EREALKRLEH FIKKKNWIAT
210 220 230 240 250
FEKPKTNPAA LDPDTTGLSP YMKMGCLSVR KFWYDVQKVY DEKKDHSTPP
260 270 280 290 300
ESLHGQLLFR ELFHLCGYAV KNFDKMKGNR ICRQIDWDYS EKFLDAWENS
310 320 330 340 350
KTGYPWIDAC MAQLRHEGWM HHLARHAVAC FLTRGDLYQS WEHGARIFEK
360 370 380 390 400
HLVDADWHLN NANWMWLSCS SFFYQYFRVY SPIGFGQKYD KEGAFIRKYL
410 420 430 440 450
PVLKDMPKKY IYEPWKAPKE VQQKAKCIIG KDYPEPIVDH SDVSETNKDR
460 470 480
MKACYDAHKR GGPIPGSVSR GATTDGAPTQ KRPKHE
Length:486
Mass (Da):56,496
Last modified:February 5, 2008 - v1
Checksum:i45141BFE16CECF9B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH991558 Genomic DNA. Translation: EDQ87586.1.
RefSeqiXP_001747506.1. XM_001747454.1.

Genome annotation databases

GeneIDi5892848.
KEGGimbr:MONBRDRAFT_27108.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH991558 Genomic DNA. Translation: EDQ87586.1.
RefSeqiXP_001747506.1. XM_001747454.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi81824.JGI27108.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5892848.
KEGGimbr:MONBRDRAFT_27108.

Phylogenomic databases

eggNOGiCOG0415.
InParanoidiA9V4B6.
KOiK02295.
OMAiRWRFLQQ.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
InterProiIPR006050. DNA_photolyase_N.
IPR005101. Photolyase_FAD-bd/Cryptochr_C.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PfamiPF00875. DNA_photolyase. 1 hit.
PF03441. FAD_binding_7. 1 hit.
[Graphical view]
SUPFAMiSSF48173. SSF48173. 1 hit.
SSF52425. SSF52425. 1 hit.
PROSITEiPS51645. PHR_CRY_ALPHA_BETA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MX1 / ATCC 50154Imported.

Entry informationi

Entry nameiA9V4B6_MONBE
AccessioniPrimary (citable) accession number: A9V4B6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: January 7, 2015
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.