A9UVH1 (A9UVH1_MONBE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EDQ90579.1

Gene names

ORF Names:

2378

Organism

Monosiga brevicollis (Choanoflagellate)

Taxonomic identifier

81824 [NCBI]

Taxonomic lineage

Eukaryota › Choanoflagellida › Codonosigidae › Monosiga

Protein attributes

Sequence length	248 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor

Binds 1 zinc ion By similarity. PIRSR PIRSR006334-3

Ontologies

Keywords
Ligand	Metal-binding PIRSR PIRSR006334-3 Zinc PIRSR PIRSR006334-3
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	cytidine deaminase activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Region	37 – 39	3	Substrate binding By similarity PIRSR PIRSR006334-2
Sites
	Active site	52	1	Proton donor By similarity PIRSR PIRSR006334-1
	Metal binding	50	1	Zinc; catalytic By similarity PIRSR PIRSR006334-3
	Metal binding	78	1	Zinc; catalytic By similarity PIRSR PIRSR006334-3
	Metal binding	81	1	Zinc; catalytic By similarity PIRSR PIRSR006334-3
Experimental info
	Non-terminal residue	1	1	EMBL EDQ90579.1
	Non-terminal residue	248	1	EMBL EDQ90579.1

Sequences

	Sequence		Length	Mass (Da)
	A9UVH1 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 45BD245EA171DB02	FASTA	248	26,887
	10 20 30 40 50 60 LQNLTDVAAS LARAPVSNFH VGAVMLTDHG HIFLGANQEF DHQAIGMSIH AEQAAISNIA 70 80 90 100 110 120 HHPDAGIPVT LAVNAAPCGH CRQFIVEMHN GIDMRLLLPQ KEPLRIADVL PHAFLPKDLN 130 140 150 160 170 180 NQHPLLVHPT IDLAADGPHE VLHEGSPGTI RETALLMASV AARKAYAPYS GCHSAVALRL 190 200 210 220 230 240 RDGRVLRAWY MENAAFNPSL PAAQSAYLQC KINGVDTTDV EVVVLAERID LAMSHRQATL TLWRHLAP

References

[1]

"The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans." JGI Sequencing King N., Westbrook M.J., Young S.L., Kuo A., Abedin M., Chapman J., Fairclough S., Hellsten U., Isogai Y., Letunic I., Marr M., Pincus D., Putnam N., Rokas A., Wright K.J., Zuzow R., Dirks W., Good M. , Goodstein D., Lemons D., Li W., Lyons J.B., Morris A., Nichols S., Richter D.J., Salamov A., Bork P., Lim W.A., Manning G., Miller W.T., McGinnis W., Shapiro H., Tjian R., Grigoriev I.V., Rokhsar D. Nature 451:783-788(2008) [PubMed: 18273011] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MX1 / ATCC 50154.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CH991547 Genomic DNA. Translation: EDQ90579.1.
RefSeq	XP_001744630.1. XM_001744578.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A9UVH1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5890053.
KEGG	mbr:MONBRDRAFT_2378.
Phylogenomic databases
OMA	LKSKHEA.
Family and domain databases
InterPro	IPR016192. APOBEC/CMP_deaminase_Zn-bd. IPR002125. CMP_dCMP_Zn-bd. IPR013171. Cyd/dCyd_deaminase_Zn-bd. IPR006263. Cyt_deam_dimer. IPR016193. Cytidine_deaminase-like. [Graphical view]
Pfam	PF00383. dCMP_cyt_deam_1. 1 hit. PF08211. dCMP_cyt_deam_2. 1 hit. [Graphical view]
PIRSF	PIRSF006334. Cdd_plus_pseudo. 1 hit.
SUPFAM	SSF53927. Cytidine_deaminase-like. 2 hits.
PROSITE	PS00903. CYT_DCMP_DEAMINASES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9UVH1_MONBE

Accession

Primary (citable) accession number: A9UVH1

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	September 21, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)