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Protein
Submitted name:

Predicted protein

Gene

PHYPADRAFT_173455

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHYPADRAFT_173455Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
Proteomesi
  • UP000006727 Componenti: Partially assembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliA9U3C2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini88 – 119RanBP2-typeInterPro annotationAdd BLAST32
Domaini212 – 303RRMInterPro annotationAdd BLAST92

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IP4Y. Eukaryota.
ENOG4111MGM. LUCA.
InParanoidiA9U3C2.
KOiK13098.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiView protein in InterPro
IPR012677. Nucleotide-bd_a/b_plait_sf.
IPR035979. RBD_domain_sf.
IPR000504. RRM_dom.
IPR001876. Znf_RanBP2.
IPR036443. Znf_RanBP2_sf.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
PF00641. zf-RanBP. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 1 hit.
SM00547. ZnF_RBZ. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
SSF90209. SSF90209. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.
PS01358. ZF_RANBP2_1. 1 hit.
PS50199. ZF_RANBP2_2. 1 hit.

Sequencei

Sequence statusi: Complete.

A9U3C2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGYVGGGGG GRYHDGGGSG GAIGDRGGPR GGGGGGQRGG FRDGGAGGRG
60 70 80 90 100
GYGGGGGGYG GGGVHGGYGG GGGGFDRGGP RGGGGGDRSG DWTCPNVTCG
110 120 130 140 150
NVNFARRMEC NKCQAPKPQS TGGGGGGGGG YGGEQGGGSY GGRQGGGNSY
160 170 180 190 200
DEPGHGGYGG RGYDREQGRS HESRGGGGGG GYGAQSREES KDAVDVPVKQ
210 220 230 240 250
CDENCGDSCD NARIYISGLP LDVKEDELRE LFGGIGQVAR IKQKRGYKDQ
260 270 280 290 300
WPYNIKIYQD ESGKNKGDAV LSYEDPHAAH SAGGFFNDYE MRGHKIKVAM
310 320 330 340 350
AAKSAPKPPP PSGGGYRGGH RGGGGPDRRD GGDSQFCKIE AIADVGVRLQ
360 370 380 390 400
AWLLWAEESS FISECSLMDC FRGDVRALWK KGMRGALRFW DYISWCNSGV
410 420 430 440 450
EIAMCSGKFL RYGEIVGNEE KTLGELHSCF QVQKRMVLFY IYCGTGCPFL
460 470 480
YLPEKANGCG MDAIKEPDDD ICNRVDNSTI A
Length:481
Mass (Da):49,861
Last modified:February 5, 2008 - v1
Checksum:iBE0FFF28AC9D8922
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS545342 Genomic DNA. Translation: EDQ49843.1.
RefSeqiXP_001785358.1. XM_001785306.1.
UniGeneiPpa.18243.

Genome annotation databases

EnsemblPlantsiPP1S462_20V6.1; PP1S462_20V6.1; PP1S462_20V6.
GeneIDi5948558.
GrameneiPP1S462_20V6.1; PP1S462_20V6.1; PP1S462_20V6.
KEGGippp:PHYPADRAFT_173455.

Similar proteinsi

Entry informationi

Entry nameiA9U3C2_PHYPA
AccessioniPrimary (citable) accession number: A9U3C2
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: March 28, 2018
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported