PHYPADRAFT_173455

Functionⁱ

GO - Molecular functionⁱ

metal ion binding Source: UniProtKB-KW
RNA binding Source: UniProtKB-UniRule

View the complete GO annotation on QuickGO ...

Keywordsⁱ

Molecular function	RNA-bindingPROSITE-ProRule annotation
Ligand	Metal-binding, Zinc

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Predicted proteinImported
Gene namesⁱ	ORF Names:PHYPADRAFT_173455Imported
Organismⁱ	Physcomitrella patens subsp. patens (Moss)Imported
Taxonomic identifierⁱ	3218 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Bryophyta › Bryophytina › Bryopsida › Funariidae › Funariales › Funariaceae › Physcomitrella
Proteomesⁱ	UP000006727 Componentⁱ: Partially assembled WGS sequence

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	A9U3C2.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	88 – 119	RanBP2-typeInterPro annotationAdd BLAST		32
Domainⁱ	212 – 303	RRMInterPro annotationAdd BLAST		92

Keywords - Domainⁱ

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGⁱ	ENOG410IP4Y. Eukaryota. ENOG4111MGM. LUCA.
InParanoidⁱ	A9U3C2.
KEGG Orthology (KO) More...KOⁱ	K13098.

Family and domain databases

Gene3Dⁱ	3.30.70.330. 1 hit.
InterProⁱ	View protein in InterPro IPR012677. Nucleotide-bd_a/b_plait_sf. IPR035979. RBD_domain_sf. IPR000504. RRM_dom. IPR001876. Znf_RanBP2. IPR036443. Znf_RanBP2_sf.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF00076. RRM_1. 1 hit. PF00641. zf-RanBP. 1 hit.
SMARTⁱ	View protein in SMART SM00360. RRM. 1 hit. SM00547. ZnF_RBZ. 1 hit.
SUPFAMⁱ	SSF54928. SSF54928. 1 hit. SSF90209. SSF90209. 1 hit.
PROSITEⁱ	View protein in PROSITE PS50102. RRM. 1 hit. PS01358. ZF_RANBP2_1. 1 hit. PS50199. ZF_RANBP2_2. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

A9U3C2-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MSGYVGGGGG GRYHDGGGSG GAIGDRGGPR GGGGGGQRGG FRDGGAGGRG 
        60         70         80         90        100
GYGGGGGGYG GGGVHGGYGG GGGGFDRGGP RGGGGGDRSG DWTCPNVTCG 
       110        120        130        140        150
NVNFARRMEC NKCQAPKPQS TGGGGGGGGG YGGEQGGGSY GGRQGGGNSY 
       160        170        180        190        200
DEPGHGGYGG RGYDREQGRS HESRGGGGGG GYGAQSREES KDAVDVPVKQ 
       210        220        230        240        250
CDENCGDSCD NARIYISGLP LDVKEDELRE LFGGIGQVAR IKQKRGYKDQ 
       260        270        280        290        300
WPYNIKIYQD ESGKNKGDAV LSYEDPHAAH SAGGFFNDYE MRGHKIKVAM 
       310        320        330        340        350
AAKSAPKPPP PSGGGYRGGH RGGGGPDRRD GGDSQFCKIE AIADVGVRLQ 
       360        370        380        390        400
AWLLWAEESS FISECSLMDC FRGDVRALWK KGMRGALRFW DYISWCNSGV 
       410        420        430        440        450
EIAMCSGKFL RYGEIVGNEE KTLGELHSCF QVQKRMVLFY IYCGTGCPFL 
       460        470        480 
YLPEKANGCG MDAIKEPDDD ICNRVDNSTI A

Length:481

Mass (Da):49,861

Last modified:February 5, 2008 - v1

Checksum:ⁱBE0FFF28AC9D8922

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	DS545342 Genomic DNA. Translation: EDQ49843.1.
NCBI Reference Sequences More...RefSeqⁱ	XP_001785358.1. XM_001785306.1.
UniGeneⁱ	Ppa.18243.

Genome annotation databases

EnsemblPlantsⁱ	PP1S462_20V6.1; PP1S462_20V6.1; PP1S462_20V6.
GeneIDⁱ	5948558.
Grameneⁱ	PP1S462_20V6.1; PP1S462_20V6.1; PP1S462_20V6.
KEGGⁱ	ppp:PHYPADRAFT_173455.

Similar proteinsⁱ

50% Identity

Protein	Similar proteins	Organisms	Length	Cluster ID	Cluster name	Size
A9U3C2	A0A151SXZ6	Cajanus cajan (Pigeon pea) (Cajanus indicus)	481	UniRef50_A9U3C2	Cluster: Predicted protein	2

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	DS545342 Genomic DNA. Translation: EDQ49843.1.
NCBI Reference Sequences More...RefSeqⁱ	XP_001785358.1. XM_001785306.1.
UniGeneⁱ	Ppa.18243.

3D structure databases

ProteinModelPortalⁱ	A9U3C2.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblPlantsⁱ	PP1S462_20V6.1; PP1S462_20V6.1; PP1S462_20V6.
GeneIDⁱ	5948558.
Grameneⁱ	PP1S462_20V6.1; PP1S462_20V6.1; PP1S462_20V6.
KEGGⁱ	ppp:PHYPADRAFT_173455.

Phylogenomic databases

eggNOGⁱ	ENOG410IP4Y. Eukaryota. ENOG4111MGM. LUCA.
InParanoidⁱ	A9U3C2.
KEGG Orthology (KO) More...KOⁱ	K13098.

Family and domain databases

Gene3Dⁱ	3.30.70.330. 1 hit.
InterProⁱ	View protein in InterPro IPR012677. Nucleotide-bd_a/b_plait_sf. IPR035979. RBD_domain_sf. IPR000504. RRM_dom. IPR001876. Znf_RanBP2. IPR036443. Znf_RanBP2_sf.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF00076. RRM_1. 1 hit. PF00641. zf-RanBP. 1 hit.
SMARTⁱ	View protein in SMART SM00360. RRM. 1 hit. SM00547. ZnF_RBZ. 1 hit.
SUPFAMⁱ	SSF54928. SSF54928. 1 hit. SSF90209. SSF90209. 1 hit.
PROSITEⁱ	View protein in PROSITE PS50102. RRM. 1 hit. PS01358. ZF_RANBP2_1. 1 hit. PS50199. ZF_RANBP2_2. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	A9U3C2_PHYPA
Accessionⁱ	A9U3C2Primary (citable) accession number: A9U3C2
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	February 5, 2008
	Last sequence update:	February 5, 2008
	Last modified:	March 28, 2018
	This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

UniProtKB - A9U3C2 (A9U3C2_PHYPA)

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Predicted protein

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Functionⁱ

GO - Molecular functionⁱ

Keywordsⁱ

Names & Taxonomyⁱ

Structureⁱ

3D structure databases

Family & Domainsⁱ

Domains and Repeats

Keywords - Domainⁱ

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - A9U3C2 (A9U3C2_PHYPA)

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Predicted protein

PHYPADRAFT_173455

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<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Phylogenomic databases

Family and domain databases

Sequence databases

Genome annotation databases

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Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

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Functionⁱ

GO - Molecular functionⁱ

Names & Taxonomyⁱ

Structureⁱ

Family & Domainsⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ