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A9TP02

- A9TP02_PHYPA

UniProt

A9TP02 - A9TP02_PHYPA

Protein
Submitted name:

Predicted protein

Gene

PHYPADRAFT_196863

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (05 Feb 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. flavin adenine dinucleotide binding Source: InterPro
    2. oxidoreductase activity, acting on the CH-CH group of donors Source: InterPro

    GO - Biological processi

    1. electron transport chain Source: InterPro
    2. tricarboxylic acid cycle Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Predicted proteinImported
    Gene namesi
    ORF Names:PHYPADRAFT_196863Imported
    OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
    Taxonomic identifieri3218 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
    ProteomesiUP000006727: Partially assembled WGS sequence

    PTM / Processingi

    Proteomic databases

    PRIDEiA9TP02.

    Interactioni

    Protein-protein interaction databases

    STRINGi3218.JGI196863.

    Structurei

    3D structure databases

    ProteinModelPortaliA9TP02.
    SMRiA9TP02. Positions 40-631.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK00234.

    Family and domain databases

    Gene3Di1.20.58.100. 1 hit.
    3.90.700.10. 1 hit.
    InterProiIPR003953. FAD_bind_dom.
    IPR003952. FRD_SDH_FAD_BS.
    IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
    IPR027477. Succ_DH/fumarate_Rdtase_cat.
    IPR011281. Succ_DH_flav_su_fwd.
    IPR014006. Succ_Dhase_FrdA_Gneg.
    [Graphical view]
    PfamiPF00890. FAD_binding_2. 1 hit.
    PF02910. Succ_DH_flav_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF46977. SSF46977. 1 hit.
    SSF56425. SSF56425. 1 hit.
    TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
    TIGR01812. sdhA_frdA_Gneg. 1 hit.
    PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A9TP02-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLRRVVESST KRLLRQRNGA LARSRSQQPK RGFAVDAKSY PIVDHTYDAI    50
    VVGAGGAGLR AAIGLSETGF TTACITKLFP TRSHTVAAQG GINAALGNMT 100
    EDDWRWHMYD TVKGSDWLGD QDAIQYMCRE APKAVIELEN YGLPFSRTED 150
    GKIYQRAFGG QSLNFGKGGQ AYRCAAAADR TGHAMLHTLY GQAMKHNTQF 200
    FVEYFALDLI MDEQGACRGV IALNMEDGTL HRFRAMNTIL ATGGYGRAYF 250
    SATSAHTCTG DGNAMAARAG IPLQDLEFVQ FHPTGIYGAG CLITEGSRGE 300
    GGILRNSEGE RFMERYAPTA KDLASRDVVS RSMTMEIREG RGVGPEKDHI 350
    YLHLNHLPPE VLKERLPGIS ETAAIFAGVD VTKEPIPVLP TVHYNMGGIP 400
    TNYHGEVLTK KGDDPDCMIP GLMAAGEAAC ASVHGANRLG ANSLLDIVIF 450
    GRACANRVAE MFKPGQKQPE LPKDAGEKTI AWLDKLRYAN GDIPTANIRN 500
    KMQRVMQNNA AVFRTQETLE EGCKLIDETV DSLSRVKTND RSLTWNTDLI 550
    ETIELENLLI NASVTMHSAE ARKESRGAHA REDFTTRDDE KWMKHTLGYW 600
    ENDRVRLDYR PVHMNTLDDE VETFPPKARV Y 631
    Length:631
    Mass (Da):69,687
    Last modified:February 5, 2008 - v1
    Checksum:iDDAEF954B32867BB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS545165 Genomic DNA. Translation: EDQ54899.1.
    RefSeqiXP_001780340.1. XM_001780288.1.
    UniGeneiPpa.7495.

    Genome annotation databases

    GeneIDi5943517.
    KEGGippp:PHYPADRAFT_196863.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS545165 Genomic DNA. Translation: EDQ54899.1 .
    RefSeqi XP_001780340.1. XM_001780288.1.
    UniGenei Ppa.7495.

    3D structure databases

    ProteinModelPortali A9TP02.
    SMRi A9TP02. Positions 40-631.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3218.JGI196863.

    Proteomic databases

    PRIDEi A9TP02.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 5943517.
    KEGGi ppp:PHYPADRAFT_196863.

    Phylogenomic databases

    KOi K00234.

    Family and domain databases

    Gene3Di 1.20.58.100. 1 hit.
    3.90.700.10. 1 hit.
    InterProi IPR003953. FAD_bind_dom.
    IPR003952. FRD_SDH_FAD_BS.
    IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
    IPR027477. Succ_DH/fumarate_Rdtase_cat.
    IPR011281. Succ_DH_flav_su_fwd.
    IPR014006. Succ_Dhase_FrdA_Gneg.
    [Graphical view ]
    Pfami PF00890. FAD_binding_2. 1 hit.
    PF02910. Succ_DH_flav_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46977. SSF46977. 1 hit.
    SSF56425. SSF56425. 1 hit.
    TIGRFAMsi TIGR01816. sdhA_forward. 1 hit.
    TIGR01812. sdhA_frdA_Gneg. 1 hit.
    PROSITEi PS00504. FRD_SDH_FAD_BINDING. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
      Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
      , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
      Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Gransden 2004Imported.

    Entry informationi

    Entry nameiA9TP02_PHYPA
    AccessioniPrimary (citable) accession number: A9TP02
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 5, 2008
    Last sequence update: February 5, 2008
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3