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A9THN6

- A9THN6_PHYPA

UniProt

A9THN6 - A9THN6_PHYPA

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Protein
Beta-amylase
Gene
PHYPADRAFT_222395
Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains.

GO - Molecular functioni

  1. beta-amylase activity Source: UniProtKB-EC

GO - Biological processi

  1. maltose biosynthetic process Source: EnsemblPlants/Gramene
  2. polysaccharide catabolic process Source: UniProtKB-KW
  3. response to cold Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-amylaseUniRule annotation (EC:3.2.1.2UniRule annotation)
Gene namesi
ORF Names:PHYPADRAFT_222395Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
ProteomesiUP000006727: Partially assembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. chloroplast stroma Source: EnsemblPlants/Gramene
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3218.JGI222395.

Structurei

3D structure databases

ProteinModelPortaliA9THN6.
SMRiA9THN6. Positions 37-481.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 14 family.UniRule annotation

Phylogenomic databases

KOiK01177.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSiPR00750. BETAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
PS00679. BETA_AMYLASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9THN6-1 [UniParc]FASTAAdd to Basket

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MDTMFPEHKS LLDWDNTADE WKEHAFHETP TSRGVHGGVP VFVMLPLDSV    50
NINNTLKRRR ALNASLLALK SAGVEGVMMD VWWGIVEKEG PRNYNWSAYR 100
ELIDMVRKHG LKVQAVMSFH QCGGNVGDSC NIPLPPWVLE EVQKNPDLAY 150
TDKAGKRNAE YISLGADNVP ALKGRTPVQC YADFMRSFRD NFKDLLGDVI 200
IEIQCGMGPA GELRYPSYPE SEGRWRFPGI GEFQCYDKYM LASLKANAQA 250
LGKPAWGHGG PCDAGNYNQW PDETGFFHRD GSWCSEYGQF FMEWYSEMIL 300
AHGERLLASA SGIFKGTGAV ISGKVAGIHW HYGTRSHAAE LTAGYYNTRT 350
RDGYATIAQM FAKYGVTLNF TCIEMRDYEQ PSQASCSPEG LVRQVALATR 400
RAGIPMAGEN ALPRFDSSAH EQIVRKSRLR MNEHGDCHEE YEPMAAFTFL 450
RMCESLFHSE NWKLFVPFVR HMEEGRTFQP WEEEHHRTET HVHATRPLVQ 500
EAASLMY 507
Length:507
Mass (Da):57,417
Last modified:February 5, 2008 - v1
Checksum:i8ECB1B76D811EC85
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS545122 Genomic DNA. Translation: EDQ57039.1.
RefSeqiXP_001778149.1. XM_001778097.1.
UniGeneiPpa.11850.

Genome annotation databases

GeneIDi5941359.
KEGGippp:PHYPADRAFT_222395.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS545122 Genomic DNA. Translation: EDQ57039.1 .
RefSeqi XP_001778149.1. XM_001778097.1.
UniGenei Ppa.11850.

3D structure databases

ProteinModelPortali A9THN6.
SMRi A9THN6. Positions 37-481.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3218.JGI222395.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5941359.
KEGGi ppp:PHYPADRAFT_222395.

Phylogenomic databases

KOi K01177.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF01373. Glyco_hydro_14. 1 hit.
[Graphical view ]
PRINTSi PR00750. BETAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00506. BETA_AMYLASE_1. 1 hit.
PS00679. BETA_AMYLASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
    Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
    , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
    Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Gransden 2004.

Entry informationi

Entry nameiA9THN6_PHYPA
AccessioniPrimary (citable) accession number: A9THN6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 14, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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