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A9TG22 (A9TG22_PHYPA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA ligase RuleBase RU000617

EC=6.5.1.1 RuleBase RU000617
Gene names
ORF Names:PHYPADRAFT_221958 EMBL EDQ57593.1
OrganismPhyscomitrella patens subsp. patens (Moss) [Reference proteome]
Taxonomic identifier3218 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella

Protein attributes

Sequence length656 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
A9TG22 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: C5B853492DD5520E

FASTA65672,907
        10         20         30         40         50         60 
MEEKKVVAST AAEAVVLLTK KETDFDPEAA AFWKPGQPVP FLFLASALDI ISDESGRLAM 

        70         80         90        100        110        120 
TNILCNVFRT VIATTPKDLL AVVTLSANRI APAHEGVELG IGDAAIVRVL TEAYGRKADQ 

       130        140        150        160        170        180 
IKAQMKTLGD LGLVAKASRT SQRTMFKSQP LTCAKVLDTF REIAKDSGNQ SQDRKRGRMK 

       190        200        210        220        230        240 
ALLVAATECE PLYLVRLLQS KLRIGLAEKT VLAALAHAAV LSEVPRVPAN QLTARLEEAE 

       250        260        270        280        290        300 
EIMKETYSVL PIYEKIISAI LEHGIRKLPE VCNFTLGIPV GPMLAKPTTG VSEVLNKFQD 

       310        320        330        340        350        360 
MEFSCEYKYD GERAQVHYLQ GGTIEIYSRN AEHNTGKFPD IVAAMPRCMK TGTETYVLDC 

       370        380        390        400        410        420 
EVVAYDREKN KILPFQVLST RARKGVVLSD IKIQVCLFAF DLLYLNGRPL LKEQLNVRRE 

       430        440        450        460        470        480 
LLYSSFQEIP GEFQFATAKN SNDLEEIQKF LEDAINDSCE GLIVKTLSKD ATYEPAKRSN 

       490        500        510        520        530        540 
NWLKLKKDYM NTGGGDSLDL VPIGAFYGRG KRVGVYGAFL LACYDEDREE FQSICKIGTG 

       550        560        570        580        590        600 
FTEAVLEERS VTLKNHVIPQ PRSYYRYGET IGVDVWFEDV EVWEVKAADL SISPVHRAAV 

       610        620        630        640        650 
GLVDPNKGIS LRFPRLMRLR EDKTPVEATS AQQVAEMYRA QKINHGHGGD ADDDDD 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS545112 Genomic DNA. Translation: EDQ57593.1.
RefSeqXP_001777550.1. XM_001777498.1.
UniGenePpa.12544.

3D structure databases

ProteinModelPortalA9TG22.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3218.JGI221958.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5940783.
KEGGppp:PHYPADRAFT_221958.

Phylogenomic databases

KOK10747.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9TG22_PHYPA
AccessionPrimary (citable) accession number: A9TG22
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 14, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)