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Protein
Submitted name:

Predicted protein

Gene

PHYPADRAFT_168470

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHYPADRAFT_168470Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
ProteomesiUP000006727 Componenti: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi3218.PP1S177_55V6.1.

Structurei

3D structure databases

ProteinModelPortaliA9T790.
SMRiA9T790. Positions 29-959.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiA9T790.
KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9T790-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFLKKIKSI DAPMRLLVPK KVSEDDMLVD YGSQLGNRFL DILESLHGKS
60 70 80 90 100
MRETVMNCYE LAGAFANSHS REEEKLQQLS SLLNNLNPTD SIVVASSFSH
110 120 130 140 150
MLNLGNLAEE IQIAYRRPTN KKGNIGDENS ALTESDLDQT FQRLKDELHK
160 170 180 190 200
SPDEIFEALK KQTVDLVFTA HPTQSVRRSL LQKHSRIRDC LSQMYQKDVT
210 220 230 240 250
AEEKQELDEA LQREIQAAFR TDEIRRSQPA PQDEMRAGMS YFHETIWNGL
260 270 280 290 300
PKFLRRVDTA LKGIGVKERL PHDVPLIQFS SWMGGDRDGN PRVTPDVTRD
310 320 330 340 350
VCLLARLMAA NLYYSQIEDL MFELSMWRCS DELKQRVAIL EAQTKKESKH
360 370 380 390 400
YTEFWKHIPP NEPFRVLLGN MRDKLYNTRE RMRQLLANGK SDINLEDTFT
410 420 430 440 450
EKSQILEPLE LCHRSLCETG DKPIADGSLL DFMRQVSCFG LSLVKLDIRQ
460 470 480 490 500
ESDRHTDVLD TITNYLGIGS YRDWSEEQRQ DWLLSELRGR RPLFGPDMPT
510 520 530 540 550
TEEVKDVLDT FKVIAELPED CFGAYIISMA TAPSDVLAVE LLQRESHIPT
560 570 580 590 600
PLRVVPLFEK LADLESAPAT LSRLFSIDWY LSRINGKQEV MIGYSDSGKD
610 620 630 640 650
AGRLSAAWQM FKAQEDLVKV AKQYEVRLTM FHGRGGTVGR GGGPTHLAIL
660 670 680 690 700
SQPPDTINGS LRVTIQGEVI EQSFGEEHLC FRTLQRFTAA TLEHGMNPPI
710 720 730 740 750
APEPEWRDLM DFMAVIATDE YRSIVFKNPR FVEYFRTATP ELEYGRMNIG
760 770 780 790 800
SRPSKRKPSG GIESLRAIPW IFAWTQTRFH LPVWLGLGAA LKQALEAGPG
810 820 830 840 850
NFDTLSRMYD LWPFFRVTID LVEMVFAKGD PRIAELYDNL LVPEELKPLG
860 870 880 890 900
EELREKYNET KSHLLKIARH TDILQGNPTL KQRLRLREPV ITALNVQQAF
910 920 930 940 950
TLKKMREQTG QGTQSESPKS TKPASDPVTL NPTTEFAPGL EDTMIITMKG

IAAGIQNTG
Length:959
Mass (Da):109,086
Last modified:February 5, 2008 - v1
Checksum:i7772355851F2D619
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS545066 Genomic DNA. Translation: EDQ60723.1.
RefSeqiXP_001774499.1. XM_001774447.1.
UniGeneiPpa.16724.

Genome annotation databases

GeneIDi5937703.
KEGGippp:PHYPADRAFT_168470.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS545066 Genomic DNA. Translation: EDQ60723.1.
RefSeqiXP_001774499.1. XM_001774447.1.
UniGeneiPpa.16724.

3D structure databases

ProteinModelPortaliA9T790.
SMRiA9T790. Positions 29-959.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3218.PP1S177_55V6.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5937703.
KEGGippp:PHYPADRAFT_168470.

Phylogenomic databases

InParanoidiA9T790.
KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
    Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
    , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
    Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Gransden 2004Imported.

Entry informationi

Entry nameiA9T790_PHYPA
AccessioniPrimary (citable) accession number: A9T790
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: June 24, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.