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A9SX65

- A9SX65_PHYPA

UniProt

A9SX65 - A9SX65_PHYPA

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Protein
Superoxide dismutase [Cu-Zn]
Gene
PHYPADRAFT_85183
Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Binds 1 copper ion per subunit By similarity.UniRule annotation
Binds 1 zinc ion per subunit By similarity.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC

GO - Biological processi

  1. cellular response to UV-B Source: EnsemblPlants/Gramene
  2. cellular response to light intensity Source: EnsemblPlants/Gramene
  3. cellular response to ozone Source: EnsemblPlants/Gramene
  4. cellular response to salt stress Source: EnsemblPlants/Gramene
  5. cellular response to sucrose stimulus Source: EnsemblPlants/Gramene
  6. gene silencing by miRNA Source: EnsemblPlants/Gramene
  7. response to copper ion Source: EnsemblPlants/Gramene
  8. response to iron ion Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
ORF Names:PHYPADRAFT_85183Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
ProteomesiUP000006727: Partially assembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. apoplast Source: EnsemblPlants/Gramene
  2. chloroplast stroma Source: EnsemblPlants/Gramene
  3. thylakoid Source: EnsemblPlants/Gramene
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3218.JGI85183.

Structurei

3D structure databases

ProteinModelPortaliA9SX65.
SMRiA9SX65. Positions 17-170.

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04565.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9SX65-1 [UniParc]FASTAAdd to Basket

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MPALGIVKSR PLTIVAATKK AVAVLKGNAS VEGVVTLLQE DDGPTKVNVK    50
ITGLTPGKHG FHLHEFGDTT NGCMSTGPHF NPEGKTHGAP EDDNRHAGDL 100
GNVIAGNDGV VEVTLEDSQI PLSGPHSVVG RAFVIHEAED DLGKGGHELS 150
STTGNAGGRL ACGVVGLTPL 170
Length:170
Mass (Da):17,350
Last modified:February 5, 2008 - v1
Checksum:iEE0861BA45B553F6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS545020 Genomic DNA. Translation: EDQ64242.1.
RefSeqiXP_001770912.1. XM_001770860.1.
UniGeneiPpa.585.

Genome annotation databases

GeneIDi5934170.
KEGGippp:PHYPADRAFT_85183.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS545020 Genomic DNA. Translation: EDQ64242.1 .
RefSeqi XP_001770912.1. XM_001770860.1.
UniGenei Ppa.585.

3D structure databases

ProteinModelPortali A9SX65.
SMRi A9SX65. Positions 17-170.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3218.JGI85183.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5934170.
KEGGi ppp:PHYPADRAFT_85183.

Phylogenomic databases

KOi K04565.

Family and domain databases

Gene3Di 2.60.40.200. 1 hit.
InterProi IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view ]
Pfami PF00080. Sod_Cu. 1 hit.
[Graphical view ]
PRINTSi PR00068. CUZNDISMTASE.
SUPFAMi SSF49329. SSF49329. 1 hit.
PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
    Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
    , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
    Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Gransden 2004.

Entry informationi

Entry nameiA9SX65_PHYPA
AccessioniPrimary (citable) accession number: A9SX65
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: July 9, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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