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A9SX65

- A9SX65_PHYPA

UniProt

A9SX65 - A9SX65_PHYPA

Protein

Superoxide dismutase [Cu-Zn]

Gene

PHYPADRAFT_85183

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (05 Feb 2008)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    GO - Biological processi

    1. cellular response to light intensity Source: EnsemblPlants/Gramene
    2. cellular response to ozone Source: EnsemblPlants/Gramene
    3. cellular response to salt stress Source: EnsemblPlants/Gramene
    4. cellular response to sucrose stimulus Source: EnsemblPlants/Gramene
    5. cellular response to UV-B Source: EnsemblPlants/Gramene
    6. gene silencing by miRNA Source: EnsemblPlants/Gramene
    7. response to copper ion Source: EnsemblPlants/Gramene
    8. response to iron ion Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    ORF Names:PHYPADRAFT_85183Imported
    OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
    Taxonomic identifieri3218 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
    ProteomesiUP000006727: Partially assembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. apoplast Source: EnsemblPlants/Gramene
    2. chloroplast stroma Source: EnsemblPlants/Gramene
    3. thylakoid Source: EnsemblPlants/Gramene

    Interactioni

    Protein-protein interaction databases

    STRINGi3218.JGI85183.

    Structurei

    3D structure databases

    ProteinModelPortaliA9SX65.
    SMRiA9SX65. Positions 17-170.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    KOiK04565.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    PRINTSiPR00068. CUZNDISMTASE.
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A9SX65-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPALGIVKSR PLTIVAATKK AVAVLKGNAS VEGVVTLLQE DDGPTKVNVK    50
    ITGLTPGKHG FHLHEFGDTT NGCMSTGPHF NPEGKTHGAP EDDNRHAGDL 100
    GNVIAGNDGV VEVTLEDSQI PLSGPHSVVG RAFVIHEAED DLGKGGHELS 150
    STTGNAGGRL ACGVVGLTPL 170
    Length:170
    Mass (Da):17,350
    Last modified:February 5, 2008 - v1
    Checksum:iEE0861BA45B553F6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS545020 Genomic DNA. Translation: EDQ64242.1.
    RefSeqiXP_001770912.1. XM_001770860.1.
    UniGeneiPpa.585.

    Genome annotation databases

    GeneIDi5934170.
    KEGGippp:PHYPADRAFT_85183.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS545020 Genomic DNA. Translation: EDQ64242.1 .
    RefSeqi XP_001770912.1. XM_001770860.1.
    UniGenei Ppa.585.

    3D structure databases

    ProteinModelPortali A9SX65.
    SMRi A9SX65. Positions 17-170.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3218.JGI85183.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 5934170.
    KEGGi ppp:PHYPADRAFT_85183.

    Phylogenomic databases

    KOi K04565.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    PRINTSi PR00068. CUZNDISMTASE.
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
      Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
      , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
      Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Gransden 2004Imported.

    Entry informationi

    Entry nameiA9SX65_PHYPA
    AccessioniPrimary (citable) accession number: A9SX65
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 5, 2008
    Last sequence update: February 5, 2008
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3